Protein–RNA interactions for Protein: Q16656

NRF1, Nuclear respiratory factor 1, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1Q16656 AC073575.2-201ENST00000614212 627 ntBASIC4.39□□□□□ -1.71
NRF1Q16656 AC107905.1-201ENST00000616204 426 ntBASIC4.39□□□□□ -1.71
NRF1Q16656 AC002044.3-201ENST00000623314 541 ntBASIC4.39□□□□□ -1.71
NRF1Q16656 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NRF1Q16656 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NRF1Q16656 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NRF1Q16656 ZFRP1-201ENST00000457579 2970 ntBASIC4.39□□□□□ -1.71
NRF1Q16656 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NRF1Q16656 MTND4P26-201ENST00000415971 1359 ntBASIC4.39□□□□□ -1.71
NRF1Q16656 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NRF1Q16656 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NRF1Q16656 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NRF1Q16656 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NRF1Q16656 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NRF1Q16656 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NRF1Q16656 AC067945.1-201ENST00000342609 618 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NRF1Q16656 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.38□□□□□ -1.71
NRF1Q16656 RNA5SP87-201ENST00000384155 118 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 U3.30-201ENST00000391308 210 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 AL590762.2-201ENST00000395798 571 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 GAPDHP15-201ENST00000398586 975 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 AC114755.2-201ENST00000413520 361 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.38□□□□□ -1.71
NRF1Q16656 AC245028.1-201ENST00000423259 256 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 SETP10-201ENST00000424368 814 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 RPL21P43-201ENST00000425440 472 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 AL360081.1-201ENST00000428299 555 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.38□□□□□ -1.71
NRF1Q16656 AC011753.3-201ENST00000443436 406 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 AL589765.3-201ENST00000446084 462 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 OR6C72P-201ENST00000451403 892 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 AC008694.2-201ENST00000517591 306 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.38□□□□□ -1.71
NRF1Q16656 AC090151.1-201ENST00000520784 730 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.38□□□□□ -1.71
NRF1Q16656 BUD31P1-201ENST00000521828 359 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.38□□□□□ -1.71
NRF1Q16656 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.38□□□□□ -1.71
NRF1Q16656 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.38□□□□□ -1.71
NRF1Q16656 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.38□□□□□ -1.71
NRF1Q16656 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NRF1Q16656 AC008759.1-201ENST00000589783 983 ntBASIC4.38□□□□□ -1.71
NRF1Q16656 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.38□□□□□ -1.71
NRF1Q16656 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.38□□□□□ -1.71
NRF1Q16656 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NRF1Q16656 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NRF1Q16656 SDAD1P1-202ENST00000524156 2051 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
NRF1Q16656 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.37□□□□□ -1.71
NRF1Q16656 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NRF1Q16656 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NRF1Q16656 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
NRF1Q16656 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NRF1Q16656 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.37□□□□□ -1.71
NRF1Q16656 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NRF1Q16656 RN7SKP95-201ENST00000362860 303 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 BMS1P3-201ENST00000372011 932 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.37□□□□□ -1.71
NRF1Q16656 RNU6-1263P-201ENST00000384601 106 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 LAP3P1-201ENST00000403648 294 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NRF1Q16656 RPL21P91-201ENST00000429231 479 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.37□□□□□ -1.71
NRF1Q16656 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.37□□□□□ -1.71
NRF1Q16656 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.37□□□□□ -1.71
NRF1Q16656 AC090013.1-201ENST00000485147 480 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NRF1Q16656 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.37□□□□□ -1.71
NRF1Q16656 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.37□□□□□ -1.71
NRF1Q16656 AC147055.1-201ENST00000509261 750 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.37□□□□□ -1.71
NRF1Q16656 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.37□□□□□ -1.71
NRF1Q16656 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.37□□□□□ -1.71
NRF1Q16656 AP000859.1-201ENST00000525536 307 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 AC063949.1-201ENST00000552900 865 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.37□□□□□ -1.71
NRF1Q16656 AC022726.1-201ENST00000587475 207 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.37□□□□□ -1.71
NRF1Q16656 HMGB2P1-201ENST00000591146 634 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.37□□□□□ -1.71
NRF1Q16656 AC008638.3-201ENST00000603341 463 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.37□□□□□ -1.71
NRF1Q16656 AC011815.3-201ENST00000624194 473 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.37□□□□□ -1.71
NRF1Q16656 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.37□□□□□ -1.71
NRF1Q16656 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
NRF1Q16656 AC007342.9-201ENST00000623877 1385 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NRF1Q16656 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
NRF1Q16656 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.37□□□□□ -1.71
NRF1Q16656 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NRF1Q16656 AC012618.3-205ENST00000637896 1496 ntBASIC4.37□□□□□ -1.71
NRF1Q16656 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NRF1Q16656 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
NRF1Q16656 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.36□□□□□ -1.71
NRF1Q16656 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.36□□□□□ -1.71
NRF1Q16656 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NRF1Q16656 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.36□□□□□ -1.71
NRF1Q16656 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms