Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.3□□□□□ -1.56
GABPAQ06546 ST13P16-201ENST00000401760 781 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 VN1R31P-201ENST00000417498 730 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 AC092017.2-201ENST00000427600 362 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
GABPAQ06546 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.3□□□□□ -1.56
GABPAQ06546 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.3□□□□□ -1.56
GABPAQ06546 HMGN1P8-201ENST00000463578 288 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 PPIAP21-201ENST00000464473 501 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GABPAQ06546 RN7SL303P-201ENST00000469773 251 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 IGBP1P5-201ENST00000507524 1000 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.3□□□□□ -1.56
GABPAQ06546 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.3□□□□□ -1.56
GABPAQ06546 RNA5SP303-201ENST00000516192 130 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.3□□□□□ -1.56
GABPAQ06546 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.3□□□□□ -1.56
GABPAQ06546 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.3□□□□□ -1.56
GABPAQ06546 AC023575.1-201ENST00000580510 358 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 ADAD1P2-201ENST00000588476 646 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.3□□□□□ -1.56
GABPAQ06546 AC090181.2-201ENST00000602975 672 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 BPIFA4P-203ENST00000603168 689 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.3□□□□□ -1.56
GABPAQ06546 OR7M1P-201ENST00000608946 533 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 AC114781.5-201ENST00000615297 108 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 AC068831.8-201ENST00000620171 435 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 LINC01808-202ENST00000641680 1116 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GABPAQ06546 AL022393.1-201ENST00000625142 1677 ntBASIC5.3□□□□□ -1.56
GABPAQ06546 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
GABPAQ06546 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
GABPAQ06546 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
GABPAQ06546 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GABPAQ06546 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.29□□□□□ -1.56
GABPAQ06546 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.29□□□□□ -1.56
GABPAQ06546 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
GABPAQ06546 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GABPAQ06546 RNU6-891P-201ENST00000384280 111 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 OR6C69P-201ENST00000394268 893 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 Z74021.1-201ENST00000423610 407 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 NPM1P26-201ENST00000426339 738 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.29□□□□□ -1.56
GABPAQ06546 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.29□□□□□ -1.56
GABPAQ06546 RPL7P33-201ENST00000444159 742 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.29□□□□□ -1.56
GABPAQ06546 NUTF2P7-201ENST00000453086 375 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.29□□□□□ -1.56
GABPAQ06546 AC109327.1-201ENST00000471666 403 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.29□□□□□ -1.56
GABPAQ06546 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.29□□□□□ -1.56
GABPAQ06546 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.29□□□□□ -1.56
GABPAQ06546 TRAV8-5-201ENST00000537369 341 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
GABPAQ06546 ATP5J2P6-201ENST00000565203 266 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 AC069366.1-201ENST00000583159 838 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.29□□□□□ -1.56
GABPAQ06546 AC020910.2-201ENST00000603635 610 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 AC090953.1-201ENST00000604305 1092 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 AC117490.2-201ENST00000610042 594 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 AC138965.3-201ENST00000623875 498 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 AC006065.6-201ENST00000625201 545 ntBASIC5.29□□□□□ -1.56
GABPAQ06546 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.29□□□□□ -1.56
GABPAQ06546 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.29□□□□□ -1.56
GABPAQ06546 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GABPAQ06546 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GABPAQ06546 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GABPAQ06546 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.29□□□□□ -1.56
GABPAQ06546 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GABPAQ06546 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
GABPAQ06546 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.29□□□□□ -1.56
GABPAQ06546 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
GABPAQ06546 AC009951.1-201ENST00000623674 2614 ntBASIC5.28□□□□□ -1.56
GABPAQ06546 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GABPAQ06546 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.28□□□□□ -1.56
GABPAQ06546 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
GABPAQ06546 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GABPAQ06546 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.28□□□□□ -1.56
GABPAQ06546 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GABPAQ06546 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
GABPAQ06546 AL731532.2-201ENST00000623542 1953 ntBASIC5.28□□□□□ -1.56
GABPAQ06546 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GABPAQ06546 RNU4-23P-201ENST00000362839 140 ntBASIC5.28□□□□□ -1.56
GABPAQ06546 RNA5SP151-201ENST00000365632 117 ntBASIC5.28□□□□□ -1.56
GABPAQ06546 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.28□□□□□ -1.56
GABPAQ06546 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.28□□□□□ -1.56
GABPAQ06546 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GABPAQ06546 RPS12P10-201ENST00000427031 377 ntBASIC5.28□□□□□ -1.56
GABPAQ06546 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.28□□□□□ -1.56
GABPAQ06546 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.28□□□□□ -1.56
GABPAQ06546 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.28□□□□□ -1.56
GABPAQ06546 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.28□□□□□ -1.56
GABPAQ06546 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.28□□□□□ -1.56
GABPAQ06546 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GABPAQ06546 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
GABPAQ06546 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.28□□□□□ -1.56
GABPAQ06546 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.28□□□□□ -1.56
GABPAQ06546 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.28□□□□□ -1.56
GABPAQ06546 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GABPAQ06546 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms