Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.57□□□□□ -1.84
HIST1H1AQ02539 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 OR56B2P-201ENST00000317102 954 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 SNORA51.1-201ENST00000363243 140 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 CHMP1B2P-201ENST00000399581 597 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AC114755.2-201ENST00000413520 361 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 LINC00993-201ENST00000420453 540 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 RPL12P43-201ENST00000420608 499 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 OR2AM1P-201ENST00000422137 422 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 SEC63P1-201ENST00000425785 1258 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 RPL7P11-201ENST00000437586 658 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AC112498.1-201ENST00000444401 332 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AC010733.1-201ENST00000451515 401 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 RPL23AP56-201ENST00000460778 453 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AC005532.2-201ENST00000467154 373 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AC100770.1-201ENST00000532310 322 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AC020910.3-201ENST00000603701 874 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 FAM27B-201ENST00000610601 213 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AC023509.5-201ENST00000617434 807 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 MIR6729-201ENST00000618194 65 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 MIR4727-201ENST00000622232 55 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AP002799.1-201ENST00000623552 423 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HIST1H1AQ02539 AC090017.1-201ENST00000548612 1779 ntBASIC3.56□□□□□ -1.84
HIST1H1AQ02539 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 IQCB2P-201ENST00000401788 1633 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 AC008725.1-201ENST00000605123 2263 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 ZFRP1-201ENST00000457579 2970 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 RN7SKP115-201ENST00000363177 317 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 RNA5SP507-201ENST00000363603 121 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 MIR765-201ENST00000390226 114 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 RNU1-82P-201ENST00000390851 165 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 DPPA2P3-201ENST00000411853 655 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 EEF1B2P5-201ENST00000444820 548 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 AC105918.1-201ENST00000474399 838 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 BX284632.1-201ENST00000478218 541 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 RPL37AP8-201ENST00000494116 276 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 AC008953.1-201ENST00000497334 318 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 RNU1-6P-201ENST00000516290 144 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 FKBP1BP1-201ENST00000553366 325 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 AL352979.3-201ENST00000553515 247 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 SNORD39.2-201ENST00000579995 76 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 AC073137.1-201ENST00000605636 634 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 AC103858.2-201ENST00000621471 543 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 AL359757.1-201ENST00000623176 255 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 AC091905.4-201ENST00000623432 202 ntBASIC3.55□□□□□ -1.84
HIST1H1AQ02539 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.55□□□□□ -1.84
HIST1H1AQ02539 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms