Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CDK3Q00526 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CDK3Q00526 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CDK3Q00526 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CDK3Q00526 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CDK3Q00526 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.64
CDK3Q00526 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
CDK3Q00526 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 AC011447.7-201ENST00000624228 1590 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.83□□□□□ -1.64
CDK3Q00526 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK3Q00526 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
CDK3Q00526 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 OR4K17-201ENST00000315543 1032 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDK3Q00526 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDK3Q00526 RNU4-31P-201ENST00000384211 141 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 RNU6-1005P-201ENST00000384519 107 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDK3Q00526 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 AC013442.1-201ENST00000397347 228 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 RNA5SP345-201ENST00000410646 108 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 RNA5SP498-201ENST00000411342 120 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 RPL37P18-201ENST00000411602 243 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 QRSL1P2-201ENST00000418582 964 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AC004074.1-201ENST00000421810 1063 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK3Q00526 RPL5P25-201ENST00000441148 775 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 OR1H1P-201ENST00000448731 937 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.83□□□□□ -1.64
CDK3Q00526 AC093166.2-201ENST00000455969 1017 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 RPS20P4-201ENST00000461659 355 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK3Q00526 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 AP003102.1-201ENST00000525638 661 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AC068339.2-201ENST00000534395 618 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.83□□□□□ -1.64
CDK3Q00526 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 AC091042.1-201ENST00000579213 173 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AL512782.1-201ENST00000603093 364 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 BNIP3P31-201ENST00000604515 566 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AL391358.1-201ENST00000605342 190 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AC010424.2-201ENST00000607594 443 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AL391834.1-201ENST00000609609 560 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AC007497.1-201ENST00000610421 561 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AC011472.4-201ENST00000615848 491 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AC018926.1-201ENST00000616335 435 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK3Q00526 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 AC006484.1-201ENST00000435086 1884 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 AC008758.3-201ENST00000507003 1829 ntBASIC4.83□□□□□ -1.64
CDK3Q00526 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CDK3Q00526 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK3Q00526 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CDK3Q00526 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK3Q00526 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDK3Q00526 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK3Q00526 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDK3Q00526 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.82□□□□□ -1.64
CDK3Q00526 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDK3Q00526 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDK3Q00526 AL355143.1-201ENST00000407101 841 ntBASIC4.82□□□□□ -1.64
CDK3Q00526 RN7SKP100-201ENST00000411258 284 ntBASIC4.82□□□□□ -1.64
CDK3Q00526 AC114755.2-201ENST00000413520 361 ntBASIC4.82□□□□□ -1.64
CDK3Q00526 AL158825.1-201ENST00000414735 521 ntBASIC4.82□□□□□ -1.64
CDK3Q00526 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.82□□□□□ -1.64
CDK3Q00526 AL121878.1-201ENST00000418638 859 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms