Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS2P54868 AL355852.1-201ENST00000454081 1771 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HMGCS2P54868 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.18□□□□□ -1.58
HMGCS2P54868 MFSD8-242ENST00000641690 4199 ntBASIC5.18□□□□□ -1.58
HMGCS2P54868 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS2P54868 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HMGCS2P54868 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HMGCS2P54868 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.18□□□□□ -1.58
HMGCS2P54868 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.17□□□□□ -1.58
HMGCS2P54868 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGCS2P54868 AP000542.2-201ENST00000623199 6179 ntBASIC5.17□□□□□ -1.58
HMGCS2P54868 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGCS2P54868 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGCS2P54868 AL158163.1-201ENST00000603915 1649 ntBASIC5.17□□□□□ -1.58
HMGCS2P54868 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGCS2P54868 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGCS2P54868 AC244033.1-201ENST00000426826 870 ntBASIC5.17□□□□□ -1.58
HMGCS2P54868 AC044797.1-201ENST00000445744 679 ntBASIC5.17□□□□□ -1.58
HMGCS2P54868 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HMGCS2P54868 RPL5P16-201ENST00000471467 790 ntBASIC5.17□□□□□ -1.58
HMGCS2P54868 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGCS2P54868 AP001804.2-201ENST00000533932 910 ntBASIC5.17□□□□□ -1.58
HMGCS2P54868 AC084033.1-201ENST00000550830 633 ntBASIC5.17□□□□□ -1.58
HMGCS2P54868 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.17□□□□□ -1.58
HMGCS2P54868 MIR6891-201ENST00000618788 93 ntBASIC5.17□□□□□ -1.58
HMGCS2P54868 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS2P54868 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGCS2P54868 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS2P54868 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.17□□□□□ -1.58
HMGCS2P54868 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS2P54868 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.17□□□□□ -1.58
HMGCS2P54868 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS2P54868 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS2P54868 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS2P54868 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS2P54868 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCS2P54868 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS2P54868 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS2P54868 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS2P54868 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCS2P54868 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS2P54868 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS2P54868 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS2P54868 AL359922.3-201ENST00000624779 1670 ntBASIC5.16□□□□□ -1.58
HMGCS2P54868 AC107068.1-201ENST00000563286 4218 ntBASIC5.16□□□□□ -1.58
HMGCS2P54868 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HMGCS2P54868 SPRR2C-201ENST00000290702 219 ntBASIC5.16□□□□□ -1.58
HMGCS2P54868 RN7SKP280-201ENST00000364196 304 ntBASIC5.16□□□□□ -1.58
HMGCS2P54868 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.16□□□□□ -1.58
HMGCS2P54868 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.16□□□□□ -1.58
HMGCS2P54868 YY1P1-201ENST00000427625 668 ntBASIC5.16□□□□□ -1.58
HMGCS2P54868 NFYAP1-201ENST00000431953 972 ntBASIC5.16□□□□□ -1.58
HMGCS2P54868 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.16□□□□□ -1.58
HMGCS2P54868 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCS2P54868 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.16□□□□□ -1.58
HMGCS2P54868 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCS2P54868 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCS2P54868 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCS2P54868 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS2P54868 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS2P54868 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.16□□□□□ -1.58
HMGCS2P54868 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS2P54868 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCS2P54868 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCS2P54868 AC034105.4-201ENST00000568304 277 ntBASIC5.16□□□□□ -1.58
HMGCS2P54868 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCS2P54868 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCS2P54868 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCS2P54868 AC090506.2-201ENST00000624521 419 ntBASIC5.16□□□□□ -1.58
HMGCS2P54868 AC140479.6-201ENST00000633535 357 ntBASIC5.16□□□□□ -1.58
HMGCS2P54868 TMEM30CP-203ENST00000637814 1035 ntBASIC5.16□□□□□ -1.58
HMGCS2P54868 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS2P54868 AL122126.1-201ENST00000546905 1318 ntBASIC5.16□□□□□ -1.58
HMGCS2P54868 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS2P54868 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCS2P54868 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
HMGCS2P54868 LARP1BP1-201ENST00000506036 1359 ntBASIC5.16□□□□□ -1.58
HMGCS2P54868 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
HMGCS2P54868 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
HMGCS2P54868 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.15□□□□□ -1.58
HMGCS2P54868 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGCS2P54868 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGCS2P54868 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
HMGCS2P54868 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGCS2P54868 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGCS2P54868 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGCS2P54868 AC011503.2-201ENST00000594230 1500 ntBASIC5.15□□□□□ -1.58
HMGCS2P54868 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMGCS2P54868 MIR23B-201ENST00000384832 97 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 MIR3065-201ENST00000390137 79 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 AC007068.1-201ENST00000396690 844 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 AL161909.1-201ENST00000397390 712 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 RPS27AP11-201ENST00000402798 447 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 NPM1P37-201ENST00000403105 874 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 SNORA11F-201ENST00000408237 128 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGCS2P54868 RCC2P2-201ENST00000422174 918 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 RPL21P43-201ENST00000425440 472 ntBASIC5.15□□□□□ -1.59
HMGCS2P54868 AL132765.1-201ENST00000434165 553 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms