Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.7□□□□□ -1.5
CPT1AP50416 RPL5P2-201ENST00000429598 854 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.7□□□□□ -1.5
CPT1AP50416 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPT1AP50416 AL359265.1-201ENST00000440296 795 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 ARAFP2-201ENST00000440565 559 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 EIF2S2P2-201ENST00000447161 982 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 NOP56P2-201ENST00000447491 769 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 OR52J1P-201ENST00000450596 932 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 AC063943.1-201ENST00000465434 453 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 IGLV2-34-201ENST00000490007 283 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 AC005412.2-201ENST00000492004 341 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 RPS27AP16-201ENST00000492222 470 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 OR7H2P-201ENST00000513483 306 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.7□□□□□ -1.5
CPT1AP50416 ZNF971P-201ENST00000562068 1249 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 MIR4789-201ENST00000577469 82 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 MIR3667-201ENST00000581025 74 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 AC011626.1-201ENST00000604710 562 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 AC018618.2-201ENST00000604770 446 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 AL450336.1-201ENST00000605180 586 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 AL022394.1-201ENST00000606979 292 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPT1AP50416 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CPT1AP50416 AC006963.1-201ENST00000624003 1052 ntBASIC5.7□□□□□ -1.5
CPT1AP50416 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.7□□□□□ -1.5
CPT1AP50416 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CPT1AP50416 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CPT1AP50416 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CPT1AP50416 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CPT1AP50416 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CPT1AP50416 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.69□□□□□ -1.5
CPT1AP50416 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 CASC19-260ENST00000641828 2001 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.69□□□□□ -1.5
CPT1AP50416 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 RN7SKP185-201ENST00000362813 326 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CPT1AP50416 AF228730.1-201ENST00000397972 663 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 HMGB1P13-201ENST00000406019 642 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.69□□□□□ -1.5
CPT1AP50416 AL592310.1-201ENST00000414330 671 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.69□□□□□ -1.5
CPT1AP50416 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 AC009506.2-201ENST00000420635 840 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.69□□□□□ -1.5
CPT1AP50416 OSTCP5-201ENST00000425293 453 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 AC011753.3-201ENST00000443436 406 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.69□□□□□ -1.5
CPT1AP50416 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.69□□□□□ -1.5
CPT1AP50416 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.69□□□□□ -1.5
CPT1AP50416 PSMC1P13-201ENST00000458195 985 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 RPS12P31-201ENST00000491419 398 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 AC008897.1-201ENST00000494006 347 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 AC026414.1-201ENST00000504046 698 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.69□□□□□ -1.5
CPT1AP50416 AC010350.1-201ENST00000504908 231 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 GAPDHP56-201ENST00000506031 988 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.69□□□□□ -1.5
CPT1AP50416 HPRT1P1-201ENST00000509498 657 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.69□□□□□ -1.5
CPT1AP50416 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.69□□□□□ -1.5
CPT1AP50416 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.69□□□□□ -1.5
CPT1AP50416 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 GCSHP4-201ENST00000538792 439 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.69□□□□□ -1.5
CPT1AP50416 MIR7853-201ENST00000584820 132 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 AC093424.1-201ENST00000604999 338 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 AP005432.2-201ENST00000608162 586 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 AP001521.2-201ENST00000608772 546 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 AC009159.2-201ENST00000617603 606 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 MIR6810-201ENST00000622701 70 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 AC026523.2-201ENST00000625039 7739 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.69□□□□□ -1.5
CPT1AP50416 AC125336.1-201ENST00000508893 2827 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.69□□□□□ -1.5
CPT1AP50416 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CPT1AP50416 AC006210.2-201ENST00000367074 1545 ntBASIC5.69□□□□□ -1.5
CPT1AP50416 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.68□□□□□ -1.5
CPT1AP50416 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.68□□□□□ -1.5
CPT1AP50416 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPT1AP50416 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.68□□□□□ -1.5
CPT1AP50416 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPT1AP50416 OR9K1P-202ENST00000641111 3217 ntBASIC5.68□□□□□ -1.5
CPT1AP50416 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPT1AP50416 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.68□□□□□ -1.5
CPT1AP50416 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPT1AP50416 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms