Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LHX1P48742 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX1P48742 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
LHX1P48742 MFSD8-216ENST00000641147 4009 ntBASIC5.02□□□□□ -1.61
LHX1P48742 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LHX1P48742 AL359922.3-201ENST00000624779 1670 ntBASIC5.02□□□□□ -1.61
LHX1P48742 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LHX1P48742 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
LHX1P48742 SPATA2P1-201ENST00000431223 2055 ntBASIC5.01□□□□□ -1.61
LHX1P48742 AL136164.3-201ENST00000624429 3978 ntBASIC5.01□□□□□ -1.61
LHX1P48742 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.01□□□□□ -1.61
LHX1P48742 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LHX1P48742 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LHX1P48742 AC008549.2-201ENST00000333482 706 ntBASIC5.01□□□□□ -1.61
LHX1P48742 SNORA70F-201ENST00000384142 135 ntBASIC5.01□□□□□ -1.61
LHX1P48742 RNU6-31P-201ENST00000384388 108 ntBASIC5.01□□□□□ -1.61
LHX1P48742 SNORA40.4-201ENST00000390971 128 ntBASIC5.01□□□□□ -1.61
LHX1P48742 RPS3AP23-201ENST00000401762 784 ntBASIC5.01□□□□□ -1.61
LHX1P48742 Z98745.1-201ENST00000402553 494 ntBASIC5.01□□□□□ -1.61
LHX1P48742 AL049697.2-201ENST00000403708 294 ntBASIC5.01□□□□□ -1.61
LHX1P48742 AP000580.1-201ENST00000404439 358 ntBASIC5.01□□□□□ -1.61
LHX1P48742 SNORA79B-201ENST00000410557 148 ntBASIC5.01□□□□□ -1.61
LHX1P48742 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.01□□□□□ -1.61
LHX1P48742 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.01□□□□□ -1.61
LHX1P48742 RPA2P2-201ENST00000419698 796 ntBASIC5.01□□□□□ -1.61
LHX1P48742 OR5M12P-201ENST00000423388 929 ntBASIC5.01□□□□□ -1.61
LHX1P48742 AC023141.6-201ENST00000429418 337 ntBASIC5.01□□□□□ -1.61
LHX1P48742 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.01□□□□□ -1.61
LHX1P48742 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.01□□□□□ -1.61
LHX1P48742 CALM1P2-201ENST00000452941 448 ntBASIC5.01□□□□□ -1.61
LHX1P48742 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.01□□□□□ -1.61
LHX1P48742 RPS4XP12-201ENST00000461747 709 ntBASIC5.01□□□□□ -1.61
LHX1P48742 RN7SL738P-201ENST00000470264 297 ntBASIC5.01□□□□□ -1.61
LHX1P48742 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.01□□□□□ -1.61
LHX1P48742 AC090686.1-201ENST00000481577 749 ntBASIC5.01□□□□□ -1.61
LHX1P48742 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
LHX1P48742 RPL23AP72-201ENST00000492447 435 ntBASIC5.01□□□□□ -1.61
LHX1P48742 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.01□□□□□ -1.61
LHX1P48742 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.01□□□□□ -1.61
LHX1P48742 IGHV3-63-201ENST00000518422 341 ntBASIC5.01□□□□□ -1.61
LHX1P48742 OR5AN2P-201ENST00000534535 896 ntBASIC5.01□□□□□ -1.61
LHX1P48742 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.01□□□□□ -1.61
LHX1P48742 AC087477.6-201ENST00000559595 843 ntBASIC5.01□□□□□ -1.61
LHX1P48742 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.01□□□□□ -1.61
LHX1P48742 AL671309.1-201ENST00000603750 544 ntBASIC5.01□□□□□ -1.61
LHX1P48742 AC007423.1-201ENST00000605009 627 ntBASIC5.01□□□□□ -1.61
LHX1P48742 AL450270.1-201ENST00000606160 391 ntBASIC5.01□□□□□ -1.61
LHX1P48742 AC025016.1-201ENST00000616746 682 ntBASIC5.01□□□□□ -1.61
LHX1P48742 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.01□□□□□ -1.61
LHX1P48742 RPL23AP61-201ENST00000623642 466 ntBASIC5.01□□□□□ -1.61
LHX1P48742 AP000720.1-201ENST00000625091 483 ntBASIC5.01□□□□□ -1.61
LHX1P48742 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.01□□□□□ -1.61
LHX1P48742 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.01□□□□□ -1.61
LHX1P48742 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LHX1P48742 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LHX1P48742 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
LHX1P48742 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LHX1P48742 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.01□□□□□ -1.61
LHX1P48742 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.01□□□□□ -1.61
LHX1P48742 UGT2B26P-201ENST00000508672 1613 ntBASIC5.01□□□□□ -1.61
LHX1P48742 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LHX1P48742 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5□□□□□ -1.61
LHX1P48742 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LHX1P48742 RLIMP2-201ENST00000427891 1563 ntBASIC5□□□□□ -1.61
LHX1P48742 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LHX1P48742 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5□□□□□ -1.61
LHX1P48742 DHX40P1-201ENST00000588725 1412 ntBASIC5□□□□□ -1.61
LHX1P48742 CASC19-206ENST00000641028 1430 ntBASIC5□□□□□ -1.61
LHX1P48742 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
LHX1P48742 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5□□□□□ -1.61
LHX1P48742 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5□□□□□ -1.61
LHX1P48742 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LHX1P48742 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5□□□□□ -1.61
LHX1P48742 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5□□□□□ -1.61
LHX1P48742 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5□□□□□ -1.61
LHX1P48742 RNA5SP505-201ENST00000364748 108 ntBASIC5□□□□□ -1.61
LHX1P48742 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5□□□□□ -1.61
LHX1P48742 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5□□□□□ -1.61
LHX1P48742 RNA5SP397-201ENST00000391323 118 ntBASIC5□□□□□ -1.61
LHX1P48742 ARL4AP5-201ENST00000404372 599 ntBASIC5□□□□□ -1.61
LHX1P48742 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LHX1P48742 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5□□□□□ -1.61
LHX1P48742 OR51B3P-201ENST00000412287 913 ntBASIC5□□□□□ -1.61
LHX1P48742 AL590806.1-201ENST00000415818 853 ntBASIC5□□□□□ -1.61
LHX1P48742 RPL23AP4-201ENST00000427757 463 ntBASIC5□□□□□ -1.61
LHX1P48742 AL157827.1-201ENST00000447622 132 ntBASIC5□□□□□ -1.61
LHX1P48742 CYCSP53-201ENST00000455540 265 ntBASIC5□□□□□ -1.61
LHX1P48742 CREM-238ENST00000488741 651 ntTSL 2 BASIC5□□□□□ -1.61
LHX1P48742 AC008628.1-201ENST00000508663 265 ntBASIC5□□□□□ -1.61
LHX1P48742 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5□□□□□ -1.61
LHX1P48742 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5□□□□□ -1.61
LHX1P48742 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5□□□□□ -1.61
LHX1P48742 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5□□□□□ -1.61
LHX1P48742 MTHFD2P4-201ENST00000515074 1025 ntBASIC5□□□□□ -1.61
LHX1P48742 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5□□□□□ -1.61
LHX1P48742 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5□□□□□ -1.61
LHX1P48742 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5□□□□□ -1.61
LHX1P48742 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5□□□□□ -1.61
LHX1P48742 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5□□□□□ -1.61
LHX1P48742 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms