Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 OR52E3P-201ENST00000452083 936 ntBASIC4.8□□□□□ -1.64
SOX2P48431 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX2P48431 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX2P48431 AL358876.1-201ENST00000453364 1075 ntBASIC4.8□□□□□ -1.64
SOX2P48431 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX2P48431 AC068228.1-201ENST00000461723 211 ntBASIC4.8□□□□□ -1.64
SOX2P48431 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX2P48431 AC098818.1-201ENST00000478593 252 ntBASIC4.8□□□□□ -1.64
SOX2P48431 AC022215.1-201ENST00000481770 362 ntBASIC4.8□□□□□ -1.64
SOX2P48431 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX2P48431 AC104971.1-201ENST00000495117 578 ntBASIC4.8□□□□□ -1.64
SOX2P48431 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX2P48431 AC091874.2-201ENST00000505889 720 ntBASIC4.8□□□□□ -1.64
SOX2P48431 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX2P48431 AC093755.1-201ENST00000512950 1023 ntBASIC4.8□□□□□ -1.64
SOX2P48431 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX2P48431 RNA5SP230-201ENST00000517039 122 ntBASIC4.8□□□□□ -1.64
SOX2P48431 CDC42P3-201ENST00000518493 633 ntBASIC4.8□□□□□ -1.64
SOX2P48431 AC092747.2-201ENST00000545069 983 ntBASIC4.8□□□□□ -1.64
SOX2P48431 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX2P48431 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX2P48431 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX2P48431 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX2P48431 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX2P48431 AC090888.1-201ENST00000561335 1141 ntBASIC4.8□□□□□ -1.64
SOX2P48431 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX2P48431 AC093591.2-201ENST00000565254 3843 ntBASIC4.8□□□□□ -1.64
SOX2P48431 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.8□□□□□ -1.64
SOX2P48431 AC002400.1-201ENST00000569310 726 ntBASIC4.8□□□□□ -1.64
SOX2P48431 MIR744-201ENST00000578242 98 ntBASIC4.8□□□□□ -1.64
SOX2P48431 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX2P48431 AP005403.1-201ENST00000579720 229 ntBASIC4.8□□□□□ -1.64
SOX2P48431 MIR4660-201ENST00000583549 74 ntBASIC4.8□□□□□ -1.64
SOX2P48431 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX2P48431 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX2P48431 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.8□□□□□ -1.64
SOX2P48431 AC080013.3-201ENST00000606839 578 ntBASIC4.8□□□□□ -1.64
SOX2P48431 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX2P48431 AL122125.1-201ENST00000616999 600 ntBASIC4.8□□□□□ -1.64
SOX2P48431 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SOX2P48431 AC022509.4-201ENST00000621404 572 ntBASIC4.8□□□□□ -1.64
SOX2P48431 MIR6813-201ENST00000621638 56 ntBASIC4.8□□□□□ -1.64
SOX2P48431 AC006840.1-201ENST00000623069 542 ntBASIC4.8□□□□□ -1.64
SOX2P48431 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SOX2P48431 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX2P48431 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SOX2P48431 LYARP1-201ENST00000436977 1501 ntBASIC4.8□□□□□ -1.64
SOX2P48431 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX2P48431 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SOX2P48431 AP005901.5-201ENST00000545779 1796 ntBASIC4.8□□□□□ -1.64
SOX2P48431 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SOX2P48431 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
SOX2P48431 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SOX2P48431 AC104966.1-201ENST00000467010 1464 ntBASIC4.8□□□□□ -1.64
SOX2P48431 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SOX2P48431 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SOX2P48431 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SOX2P48431 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 AC019072.1-201ENST00000604535 1551 ntBASIC4.79□□□□□ -1.64
SOX2P48431 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.79□□□□□ -1.64
SOX2P48431 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX2P48431 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.79□□□□□ -1.64
SOX2P48431 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
SOX2P48431 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SOX2P48431 AC053481.2-202ENST00000582394 1500 ntBASIC4.79□□□□□ -1.64
SOX2P48431 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SOX2P48431 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 RN7SKP184-201ENST00000362348 333 ntBASIC4.79□□□□□ -1.64
SOX2P48431 SNORA64.1-201ENST00000362600 132 ntBASIC4.79□□□□□ -1.64
SOX2P48431 Y_RNA.192-201ENST00000363977 102 ntBASIC4.79□□□□□ -1.64
SOX2P48431 RNU6-560P-201ENST00000364007 108 ntBASIC4.79□□□□□ -1.64
SOX2P48431 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX2P48431 AC093719.1-202ENST00000392735 373 ntBASIC4.79□□□□□ -1.64
SOX2P48431 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SOX2P48431 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.79□□□□□ -1.64
SOX2P48431 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.79□□□□□ -1.64
SOX2P48431 RN7SKP59-201ENST00000410520 314 ntBASIC4.79□□□□□ -1.64
SOX2P48431 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX2P48431 AC234781.2-201ENST00000426370 994 ntBASIC4.79□□□□□ -1.64
SOX2P48431 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX2P48431 RPL7AP49-201ENST00000429522 581 ntBASIC4.79□□□□□ -1.64
SOX2P48431 VN1R108P-201ENST00000431580 830 ntBASIC4.79□□□□□ -1.64
SOX2P48431 AL591438.1-201ENST00000433508 581 ntBASIC4.79□□□□□ -1.64
SOX2P48431 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.79□□□□□ -1.64
SOX2P48431 RPL19P16-201ENST00000433839 588 ntBASIC4.79□□□□□ -1.64
SOX2P48431 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX2P48431 GTF2IP7-202ENST00000436677 309 ntBASIC4.79□□□□□ -1.64
SOX2P48431 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX2P48431 RPL12P18-201ENST00000437175 325 ntBASIC4.79□□□□□ -1.64
SOX2P48431 AC092393.1-201ENST00000439625 742 ntBASIC4.79□□□□□ -1.64
SOX2P48431 RPS10P18-201ENST00000442662 495 ntBASIC4.79□□□□□ -1.64
SOX2P48431 MTND5P2-201ENST00000442927 1142 ntBASIC4.79□□□□□ -1.64
SOX2P48431 AL935212.3-201ENST00000450729 284 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms