Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC104307.1-201ENST00000616142 196 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 AL391262.2-201ENST00000622466 494 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 AP006248.2-201ENST00000623309 592 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 AC099494.2-201ENST00000623371 978 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
HNF4AP41235 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HNF4AP41235 RNF6P1-201ENST00000444889 1784 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HNF4AP41235 Z73965.1-201ENST00000623412 2297 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HNF4AP41235 AC022893.2-201ENST00000564832 3296 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HNF4AP41235 AL022393.1-201ENST00000625142 1677 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.89□□□□□ -1.63
HNF4AP41235 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.89□□□□□ -1.63
HNF4AP41235 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HNF4AP41235 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.89□□□□□ -1.63
HNF4AP41235 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.89□□□□□ -1.63
HNF4AP41235 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HNF4AP41235 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HNF4AP41235 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HNF4AP41235 MIR1271-201ENST00000408537 86 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 RN7SKP114-201ENST00000410327 279 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.89□□□□□ -1.63
HNF4AP41235 RPS6P14-201ENST00000425165 719 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.89□□□□□ -1.63
HNF4AP41235 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.89□□□□□ -1.63
HNF4AP41235 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.89□□□□□ -1.63
HNF4AP41235 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.89□□□□□ -1.63
HNF4AP41235 YWHAZP2-201ENST00000440317 728 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 XKRY2-201ENST00000442362 1093 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 SUMO2P1-206ENST00000445436 284 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 KNOP1P3-201ENST00000446933 426 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 AC005532.2-201ENST00000467154 373 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 SYT14P1-201ENST00000481459 721 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 AC104687.1-201ENST00000485829 412 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HNF4AP41235 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.89□□□□□ -1.63
HNF4AP41235 RN7SKP260-201ENST00000516907 149 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 RNU6-467P-201ENST00000517027 110 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.89□□□□□ -1.63
HNF4AP41235 VTA1P2-201ENST00000520205 911 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.89□□□□□ -1.63
HNF4AP41235 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.89□□□□□ -1.63
HNF4AP41235 BNIP3P1-201ENST00000547295 580 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 AC063949.1-201ENST00000552900 865 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.89□□□□□ -1.63
HNF4AP41235 AGGF1P9-201ENST00000561884 913 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.89□□□□□ -1.63
HNF4AP41235 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.89□□□□□ -1.63
HNF4AP41235 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.89□□□□□ -1.63
HNF4AP41235 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.89□□□□□ -1.63
HNF4AP41235 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.89□□□□□ -1.63
HNF4AP41235 AC073869.10-201ENST00000642016 354 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HNF4AP41235 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HNF4AP41235 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HNF4AP41235 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.89□□□□□ -1.63
HNF4AP41235 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
HNF4AP41235 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HNF4AP41235 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.89□□□□□ -1.63
HNF4AP41235 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.89□□□□□ -1.63
HNF4AP41235 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HNF4AP41235 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HNF4AP41235 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HNF4AP41235 AL133268.1-201ENST00000405676 1401 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 AL672167.1-204ENST00000641875 3017 ntBASIC4.89□□□□□ -1.63
HNF4AP41235 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HNF4AP41235 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HNF4AP41235 AC120338.1-201ENST00000625074 1541 ntBASIC4.88□□□□□ -1.63
HNF4AP41235 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HNF4AP41235 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HNF4AP41235 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.88□□□□□ -1.63
HNF4AP41235 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.88□□□□□ -1.63
HNF4AP41235 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.88□□□□□ -1.63
HNF4AP41235 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HNF4AP41235 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HNF4AP41235 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HNF4AP41235 SNORD51.1-201ENST00000365405 77 ntBASIC4.88□□□□□ -1.63
HNF4AP41235 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.88□□□□□ -1.63
HNF4AP41235 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.88□□□□□ -1.63
HNF4AP41235 RN7SKP273-201ENST00000411392 314 ntBASIC4.88□□□□□ -1.63
HNF4AP41235 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.88□□□□□ -1.63
HNF4AP41235 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.88□□□□□ -1.63
HNF4AP41235 DDX39BP1-205ENST00000422507 192 ntBASIC4.88□□□□□ -1.63
HNF4AP41235 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.88□□□□□ -1.63
HNF4AP41235 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.88□□□□□ -1.63
HNF4AP41235 EEF1B2P5-201ENST00000444820 548 ntBASIC4.88□□□□□ -1.63
HNF4AP41235 AL354714.3-201ENST00000447284 493 ntBASIC4.88□□□□□ -1.63
HNF4AP41235 RPL31P44-201ENST00000447680 377 ntBASIC4.88□□□□□ -1.63
HNF4AP41235 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.88□□□□□ -1.63
HNF4AP41235 RPL7P31-201ENST00000450192 724 ntBASIC4.88□□□□□ -1.63
HNF4AP41235 AC093663.2-201ENST00000484625 313 ntBASIC4.88□□□□□ -1.63
HNF4AP41235 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HNF4AP41235 SNRPCP2-201ENST00000504370 475 ntBASIC4.88□□□□□ -1.63
HNF4AP41235 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.88□□□□□ -1.63
HNF4AP41235 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.88□□□□□ -1.63
HNF4AP41235 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.88□□□□□ -1.63
HNF4AP41235 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.88□□□□□ -1.63
HNF4AP41235 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms