Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 OR11H4-201ENST00000315409 1082 ntBASIC5.16□□□□□ -1.58
COL4A5P29400 EI24P3-201ENST00000399046 1062 ntBASIC5.16□□□□□ -1.58
COL4A5P29400 AC068533.1-201ENST00000418542 415 ntBASIC5.16□□□□□ -1.58
COL4A5P29400 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL4A5P29400 AL691449.1-201ENST00000426570 421 ntBASIC5.16□□□□□ -1.58
COL4A5P29400 CDY14P-201ENST00000431260 1014 ntBASIC5.16□□□□□ -1.58
COL4A5P29400 CDY12P-201ENST00000440679 1015 ntBASIC5.16□□□□□ -1.58
COL4A5P29400 CDY13P-201ENST00000445813 1015 ntBASIC5.16□□□□□ -1.58
COL4A5P29400 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.16□□□□□ -1.58
COL4A5P29400 CDY23P-201ENST00000451661 1014 ntBASIC5.16□□□□□ -1.58
COL4A5P29400 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.16□□□□□ -1.58
COL4A5P29400 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.16□□□□□ -1.58
COL4A5P29400 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.16□□□□□ -1.58
COL4A5P29400 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.16□□□□□ -1.58
COL4A5P29400 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.16□□□□□ -1.58
COL4A5P29400 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.16□□□□□ -1.58
COL4A5P29400 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.16□□□□□ -1.58
COL4A5P29400 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.16□□□□□ -1.58
COL4A5P29400 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.16□□□□□ -1.58
COL4A5P29400 AL021997.2-201ENST00000615674 271 ntBASIC5.16□□□□□ -1.58
COL4A5P29400 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
COL4A5P29400 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COL4A5P29400 MAPK10-372ENST00000641954 3413 ntBASIC5.16□□□□□ -1.58
COL4A5P29400 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.16□□□□□ -1.58
COL4A5P29400 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL4A5P29400 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL4A5P29400 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.16□□□□□ -1.58
COL4A5P29400 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
COL4A5P29400 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL4A5P29400 RNU1-20P-201ENST00000363314 162 ntBASIC5.15□□□□□ -1.58
COL4A5P29400 U8.11-201ENST00000384699 133 ntBASIC5.15□□□□□ -1.58
COL4A5P29400 U8.12-201ENST00000384701 133 ntBASIC5.15□□□□□ -1.58
COL4A5P29400 RNU4-6P-201ENST00000410804 122 ntBASIC5.15□□□□□ -1.58
COL4A5P29400 RAB9AP3-201ENST00000412737 573 ntBASIC5.15□□□□□ -1.58
COL4A5P29400 TCEA1P4-201ENST00000415066 844 ntBASIC5.15□□□□□ -1.58
COL4A5P29400 AC008280.1-201ENST00000418851 412 ntBASIC5.15□□□□□ -1.58
COL4A5P29400 AC114814.2-201ENST00000419195 485 ntBASIC5.15□□□□□ -1.58
COL4A5P29400 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL4A5P29400 NOTCH2P1-201ENST00000443481 624 ntBASIC5.15□□□□□ -1.58
COL4A5P29400 RAB9AP1-201ENST00000449393 573 ntBASIC5.15□□□□□ -1.58
COL4A5P29400 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.15□□□□□ -1.58
COL4A5P29400 U8.18-201ENST00000459285 133 ntBASIC5.15□□□□□ -1.58
COL4A5P29400 RN7SL812P-201ENST00000493791 279 ntBASIC5.15□□□□□ -1.58
COL4A5P29400 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
COL4A5P29400 AC006499.6-201ENST00000511169 607 ntBASIC5.15□□□□□ -1.58
COL4A5P29400 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.15□□□□□ -1.58
COL4A5P29400 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.15□□□□□ -1.58
COL4A5P29400 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.15□□□□□ -1.58
COL4A5P29400 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.15□□□□□ -1.58
COL4A5P29400 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.15□□□□□ -1.58
COL4A5P29400 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.15□□□□□ -1.58
COL4A5P29400 AC112230.1-201ENST00000604342 547 ntBASIC5.15□□□□□ -1.58
COL4A5P29400 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL4A5P29400 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL4A5P29400 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL4A5P29400 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
COL4A5P29400 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL4A5P29400 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL4A5P29400 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.15□□□□□ -1.59
COL4A5P29400 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL4A5P29400 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL4A5P29400 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL4A5P29400 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
COL4A5P29400 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.15□□□□□ -1.59
COL4A5P29400 TCEA1P3-201ENST00000443005 880 ntBASIC5.15□□□□□ -1.59
COL4A5P29400 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.15□□□□□ -1.59
COL4A5P29400 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.15□□□□□ -1.59
COL4A5P29400 RNA5SP497-201ENST00000516081 97 ntBASIC5.15□□□□□ -1.59
COL4A5P29400 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.14□□□□□ -1.59
COL4A5P29400 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A5P29400 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A5P29400 AC233968.1-201ENST00000611212 1300 ntBASIC5.14□□□□□ -1.59
COL4A5P29400 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A5P29400 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A5P29400 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A5P29400 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.14□□□□□ -1.59
COL4A5P29400 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A5P29400 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
COL4A5P29400 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.14□□□□□ -1.59
COL4A5P29400 AC091286.1-201ENST00000431233 461 ntBASIC5.14□□□□□ -1.59
COL4A5P29400 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.14□□□□□ -1.59
COL4A5P29400 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.14□□□□□ -1.59
COL4A5P29400 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A5P29400 AC104164.2-201ENST00000496953 495 ntBASIC5.14□□□□□ -1.59
COL4A5P29400 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.14□□□□□ -1.59
COL4A5P29400 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.14□□□□□ -1.59
COL4A5P29400 AC120057.2-201ENST00000571520 271 ntBASIC5.14□□□□□ -1.59
COL4A5P29400 MIR3944-201ENST00000581277 108 ntBASIC5.14□□□□□ -1.59
COL4A5P29400 Z98200.1-201ENST00000607298 470 ntBASIC5.14□□□□□ -1.59
COL4A5P29400 AL357559.1-201ENST00000622228 274 ntBASIC5.14□□□□□ -1.59
COL4A5P29400 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.14□□□□□ -1.59
COL4A5P29400 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A5P29400 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A5P29400 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
COL4A5P29400 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.13□□□□□ -1.59
COL4A5P29400 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A5P29400 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.13□□□□□ -1.59
COL4A5P29400 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A5P29400 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.13□□□□□ -1.59
COL4A5P29400 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms