Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL590233.1-201ENST00000430017 456 ntBASIC5.77□□□□□ -1.49
ATF4P18848 RPEP2-201ENST00000432149 701 ntBASIC5.77□□□□□ -1.49
ATF4P18848 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.77□□□□□ -1.49
ATF4P18848 AL356276.2-201ENST00000435919 558 ntBASIC5.77□□□□□ -1.49
ATF4P18848 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 AL139135.2-201ENST00000445040 433 ntBASIC5.77□□□□□ -1.49
ATF4P18848 NOP56P2-201ENST00000447491 769 ntBASIC5.77□□□□□ -1.49
ATF4P18848 AL445466.1-201ENST00000448432 357 ntBASIC5.77□□□□□ -1.49
ATF4P18848 PSPHP1-201ENST00000450062 261 ntBASIC5.77□□□□□ -1.49
ATF4P18848 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF4P18848 RPS7P7-201ENST00000463499 571 ntBASIC5.77□□□□□ -1.49
ATF4P18848 TDGF1P6-201ENST00000463873 448 ntBASIC5.77□□□□□ -1.49
ATF4P18848 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
ATF4P18848 AC087385.2-201ENST00000477729 498 ntBASIC5.77□□□□□ -1.49
ATF4P18848 RPL7AP23-201ENST00000482625 776 ntBASIC5.77□□□□□ -1.49
ATF4P18848 ALG13-214ENST00000482742 620 ntTSL 2 BASIC5.77□□□□□ -1.49
ATF4P18848 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.77□□□□□ -1.49
ATF4P18848 IGLVIV-53-201ENST00000520107 367 ntBASIC5.77□□□□□ -1.49
ATF4P18848 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
ATF4P18848 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.77□□□□□ -1.49
ATF4P18848 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC5.77□□□□□ -1.49
ATF4P18848 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.77□□□□□ -1.49
ATF4P18848 AC084757.1-201ENST00000559987 490 ntBASIC5.77□□□□□ -1.49
ATF4P18848 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC5.77□□□□□ -1.49
ATF4P18848 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF4P18848 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.77□□□□□ -1.49
ATF4P18848 OR4G1P-201ENST00000588632 938 ntBASIC5.77□□□□□ -1.49
ATF4P18848 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF4P18848 CKS1BP3-201ENST00000600888 237 ntBASIC5.77□□□□□ -1.49
ATF4P18848 AC011468.4-201ENST00000603942 409 ntBASIC5.77□□□□□ -1.49
ATF4P18848 AC010857.1-201ENST00000606398 594 ntBASIC5.77□□□□□ -1.49
ATF4P18848 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF4P18848 AL592295.2-201ENST00000612578 206 ntBASIC5.77□□□□□ -1.49
ATF4P18848 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF4P18848 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
ATF4P18848 AC099654.13-201ENST00000639774 207 ntBASIC5.77□□□□□ -1.49
ATF4P18848 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.77□□□□□ -1.49
ATF4P18848 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF4P18848 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF4P18848 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF4P18848 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 AC095050.2-201ENST00000510748 1458 ntBASIC5.77□□□□□ -1.49
ATF4P18848 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.76□□□□□ -1.49
ATF4P18848 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.76□□□□□ -1.49
ATF4P18848 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATF4P18848 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.76□□□□□ -1.49
ATF4P18848 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATF4P18848 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATF4P18848 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATF4P18848 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.76□□□□□ -1.49
ATF4P18848 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATF4P18848 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATF4P18848 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATF4P18848 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATF4P18848 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
ATF4P18848 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
ATF4P18848 Y_RNA.248-201ENST00000364501 109 ntBASIC5.76□□□□□ -1.49
ATF4P18848 RNU6-343P-201ENST00000364709 104 ntBASIC5.76□□□□□ -1.49
ATF4P18848 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC5.76□□□□□ -1.49
ATF4P18848 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
ATF4P18848 RPS3AP36-201ENST00000398190 775 ntBASIC5.76□□□□□ -1.49
ATF4P18848 RPS20P2-201ENST00000402520 389 ntBASIC5.76□□□□□ -1.49
ATF4P18848 MRPL42P2-201ENST00000403169 426 ntBASIC5.76□□□□□ -1.49
ATF4P18848 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATF4P18848 RNU2-8P-201ENST00000410727 190 ntBASIC5.76□□□□□ -1.49
ATF4P18848 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.76□□□□□ -1.49
ATF4P18848 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.76□□□□□ -1.49
ATF4P18848 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.76□□□□□ -1.49
ATF4P18848 RBMY2JP-201ENST00000425544 1059 ntBASIC5.76□□□□□ -1.49
ATF4P18848 AC104837.2-201ENST00000427236 424 ntBASIC5.76□□□□□ -1.49
ATF4P18848 OR4F13P-201ENST00000428478 931 ntBASIC5.76□□□□□ -1.49
ATF4P18848 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.76□□□□□ -1.49
ATF4P18848 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATF4P18848 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC5.76□□□□□ -1.49
ATF4P18848 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATF4P18848 RPL7P11-201ENST00000437586 658 ntBASIC5.76□□□□□ -1.49
ATF4P18848 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.76□□□□□ -1.49
ATF4P18848 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATF4P18848 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC5.76□□□□□ -1.49
ATF4P18848 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC5.76□□□□□ -1.49
ATF4P18848 RPSAP49-201ENST00000445182 886 ntBASIC5.76□□□□□ -1.49
ATF4P18848 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.76□□□□□ -1.49
ATF4P18848 RPS20P32-201ENST00000456044 356 ntBASIC5.76□□□□□ -1.49
ATF4P18848 MTAPP1-201ENST00000489154 819 ntBASIC5.76□□□□□ -1.49
ATF4P18848 RPSAP51-201ENST00000497462 645 ntBASIC5.76□□□□□ -1.49
ATF4P18848 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.76□□□□□ -1.49
ATF4P18848 AC006390.1-201ENST00000508068 283 ntBASIC5.76□□□□□ -1.49
ATF4P18848 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC5.76□□□□□ -1.49
ATF4P18848 AC010493.1-201ENST00000513479 292 ntBASIC5.76□□□□□ -1.49
ATF4P18848 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
ATF4P18848 OR7E1P-201ENST00000533891 958 ntBASIC5.76□□□□□ -1.49
ATF4P18848 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC5.76□□□□□ -1.49
ATF4P18848 AC068993.1-201ENST00000546724 589 ntBASIC5.76□□□□□ -1.49
ATF4P18848 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.76□□□□□ -1.49
ATF4P18848 NUTF2P2-201ENST00000551207 384 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms