Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC119501.1-201ENST00000603646 475 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 AC005191.1-201ENST00000603950 358 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 AL356218.2-201ENST00000605264 187 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 AC026979.4-201ENST00000606555 645 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 uc_338.13-201ENST00000618243 179 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL3L1P16619 AP003497.2-201ENST00000624220 967 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL3L1P16619 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL3L1P16619 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCL3L1P16619 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CCL3L1P16619 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCL3L1P16619 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCL3L1P16619 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCL3L1P16619 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCL3L1P16619 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.59□□□□□ -1.84
CCL3L1P16619 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
CCL3L1P16619 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.59□□□□□ -1.84
CCL3L1P16619 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCL3L1P16619 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL3L1P16619 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCL3L1P16619 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 AC068870.3-201ENST00000625077 2536 ntBASIC3.58□□□□□ -1.84
CCL3L1P16619 RNA5SP175-201ENST00000364275 119 ntBASIC3.58□□□□□ -1.84
CCL3L1P16619 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.58□□□□□ -1.84
CCL3L1P16619 AC004448.2-201ENST00000422360 586 ntBASIC3.58□□□□□ -1.84
CCL3L1P16619 RPS29P17-201ENST00000430795 166 ntBASIC3.58□□□□□ -1.84
CCL3L1P16619 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.58□□□□□ -1.84
CCL3L1P16619 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL3L1P16619 ARL4AP3-201ENST00000441452 574 ntBASIC3.58□□□□□ -1.84
CCL3L1P16619 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.58□□□□□ -1.84
CCL3L1P16619 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL3L1P16619 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL3L1P16619 RN7SL817P-201ENST00000480777 288 ntBASIC3.58□□□□□ -1.84
CCL3L1P16619 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL3L1P16619 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL3L1P16619 AC093840.1-201ENST00000511599 336 ntBASIC3.58□□□□□ -1.84
CCL3L1P16619 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC3.58□□□□□ -1.84
CCL3L1P16619 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL3L1P16619 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.58□□□□□ -1.84
CCL3L1P16619 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL3L1P16619 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL3L1P16619 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCL3L1P16619 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL3L1P16619 AC005034.4-201ENST00000603612 899 ntBASIC3.58□□□□□ -1.84
CCL3L1P16619 AL034374.2-201ENST00000605281 548 ntBASIC3.58□□□□□ -1.84
CCL3L1P16619 AC091979.2-201ENST00000607514 214 ntBASIC3.58□□□□□ -1.84
CCL3L1P16619 AL021997.2-201ENST00000615674 271 ntBASIC3.58□□□□□ -1.84
CCL3L1P16619 MIR7641-1-201ENST00000627518 61 ntBASIC3.58□□□□□ -1.84
CCL3L1P16619 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC3.58□□□□□ -1.84
CCL3L1P16619 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CCL3L1P16619 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL3L1P16619 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
CCL3L1P16619 AC125336.1-201ENST00000508893 2827 ntBASIC3.57□□□□□ -1.84
CCL3L1P16619 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCL3L1P16619 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
CCL3L1P16619 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCL3L1P16619 RNA5SP509-201ENST00000364577 119 ntBASIC3.57□□□□□ -1.84
CCL3L1P16619 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.57□□□□□ -1.84
CCL3L1P16619 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.57□□□□□ -1.84
CCL3L1P16619 RN7SKP216-201ENST00000411050 312 ntBASIC3.57□□□□□ -1.84
CCL3L1P16619 NRBF2P2-201ENST00000413087 861 ntBASIC3.57□□□□□ -1.84
CCL3L1P16619 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCL3L1P16619 RPL21P108-201ENST00000413857 481 ntBASIC3.57□□□□□ -1.84
CCL3L1P16619 AC009237.10-201ENST00000414112 510 ntBASIC3.57□□□□□ -1.84
CCL3L1P16619 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL3L1P16619 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL3L1P16619 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL3L1P16619 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.57□□□□□ -1.84
CCL3L1P16619 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.57□□□□□ -1.84
CCL3L1P16619 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.57□□□□□ -1.84
CCL3L1P16619 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.57□□□□□ -1.84
CCL3L1P16619 AC005008.1-201ENST00000456151 612 ntBASIC3.57□□□□□ -1.84
CCL3L1P16619 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL3L1P16619 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC3.57□□□□□ -1.84
CCL3L1P16619 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.57□□□□□ -1.84
CCL3L1P16619 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL3L1P16619 RNA5SP464-201ENST00000516251 108 ntBASIC3.57□□□□□ -1.84
CCL3L1P16619 AP002981.1-201ENST00000517692 975 ntBASIC3.57□□□□□ -1.84
CCL3L1P16619 AC020937.1-201ENST00000519677 1013 ntBASIC3.57□□□□□ -1.84
CCL3L1P16619 C1GALT1P3-201ENST00000522049 819 ntBASIC3.57□□□□□ -1.84
CCL3L1P16619 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCL3L1P16619 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.57□□□□□ -1.84
CCL3L1P16619 AC090515.3-201ENST00000560431 315 ntBASIC3.57□□□□□ -1.84
CCL3L1P16619 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.57□□□□□ -1.84
CCL3L1P16619 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.57□□□□□ -1.84
CCL3L1P16619 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms