Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DOAP06340 AC093422.3-201ENST00000428506 305 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 RPL7P11-201ENST00000437586 658 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DOAP06340 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 AC004980.3-201ENST00000447046 365 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 OR52J1P-201ENST00000450596 932 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DOAP06340 AC010468.1-201ENST00000461022 817 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DOAP06340 PRDX3P4-201ENST00000470828 747 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.96□□□□□ -1.46
HLA-DOAP06340 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DOAP06340 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.96□□□□□ -1.46
HLA-DOAP06340 GAPDHP56-201ENST00000506031 988 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 RNU6-1334P-201ENST00000516032 105 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 AC092709.1-201ENST00000521355 1045 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 AL356057.1-201ENST00000533798 831 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 GCSHP4-201ENST00000538792 439 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-DOAP06340 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DOAP06340 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-DOAP06340 MIR4737-201ENST00000583979 81 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 PIGPP4-201ENST00000584447 307 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DOAP06340 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-DOAP06340 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.96□□□□□ -1.46
HLA-DOAP06340 AP002802.2-201ENST00000605877 235 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 AC015922.4-201ENST00000612568 690 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 AC093875.1-201ENST00000623688 504 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 AP001153.1-201ENST00000641024 338 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.96□□□□□ -1.46
HLA-DOAP06340 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DOAP06340 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC112198.2-201ENST00000426589 6996 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 Z98755.1-201ENST00000407015 1384 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DOAP06340 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DOAP06340 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DOAP06340 RNU6-1005P-201ENST00000384519 107 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 AL603865.2-201ENST00000401679 213 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 NPM1P37-201ENST00000403105 874 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 Y_RNA.625-201ENST00000411256 107 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 COX6CP13-201ENST00000428703 226 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 RPS29P9-201ENST00000440360 171 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 KATNBL1P3-201ENST00000443475 909 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC063943.1-201ENST00000465434 453 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC093752.1-206ENST00000511823 336 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 AL671862.1-201ENST00000515851 349 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC125611.1-201ENST00000549563 229 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 MIR4420-201ENST00000583944 77 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC087283.1-201ENST00000604029 1074 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC005377.1-201ENST00000605126 456 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC093673.2-201ENST00000609674 331 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC009090.3-201ENST00000616553 565 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 AL035461.2-201ENST00000619201 524 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC098679.4-201ENST00000624241 654 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC017037.3-201ENST00000625016 472 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DOAP06340 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DOAP06340 AC012618.3-205ENST00000637896 1496 ntBASIC5.95□□□□□ -1.46
HLA-DOAP06340 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-DOAP06340 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-DOAP06340 CDY11P-201ENST00000447168 1651 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DOAP06340 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.94□□□□□ -1.46
HLA-DOAP06340 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DOAP06340 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
HLA-DOAP06340 SNORD116-1-201ENST00000384335 95 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 AL035079.1-201ENST00000405210 287 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.94□□□□□ -1.46
HLA-DOAP06340 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DOAP06340 OR5M12P-201ENST00000423388 929 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 RPL5P2-201ENST00000429598 854 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-DOAP06340 NPM1P18-201ENST00000434232 732 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 MTND2P40-201ENST00000436718 841 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms