Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL161756.3-201ENST00000641216 2071 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.6□□□□□ -1.51
CNOT4O95628 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 AL359976.1-201ENST00000418655 3528 ntBASIC5.6□□□□□ -1.51
CNOT4O95628 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CNOT4O95628 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.59□□□□□ -1.51
CNOT4O95628 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 AL662795.2-201ENST00000624252 3706 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
CNOT4O95628 AC024651.2-201ENST00000562480 2098 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.59□□□□□ -1.51
CNOT4O95628 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CNOT4O95628 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CNOT4O95628 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 RNU6-1042P-201ENST00000384204 107 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.59□□□□□ -1.51
CNOT4O95628 AL590290.1-201ENST00000405336 380 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AC013404.1-201ENST00000413068 249 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 NRBF2P2-201ENST00000413087 861 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.59□□□□□ -1.51
CNOT4O95628 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.59□□□□□ -1.51
CNOT4O95628 GNG5P5-201ENST00000420444 220 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 GTF2IP23-201ENST00000423746 351 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.59□□□□□ -1.51
CNOT4O95628 RPL7P29-201ENST00000437151 728 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 UBE2V1P8-201ENST00000437166 265 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AC091862.1-201ENST00000438016 1100 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AC241584.1-201ENST00000438469 1241 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.59□□□□□ -1.51
CNOT4O95628 USP9YP22-201ENST00000438971 294 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.59□□□□□ -1.51
CNOT4O95628 TRIM60P18-201ENST00000441518 828 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 RPL36AP33-201ENST00000450395 310 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.59□□□□□ -1.51
CNOT4O95628 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.59□□□□□ -1.51
CNOT4O95628 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.59□□□□□ -1.51
CNOT4O95628 AL603882.1-201ENST00000463059 681 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.59□□□□□ -1.51
CNOT4O95628 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.59□□□□□ -1.51
CNOT4O95628 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.59□□□□□ -1.51
CNOT4O95628 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
CNOT4O95628 AC104109.1-201ENST00000498563 436 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.59□□□□□ -1.51
CNOT4O95628 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.59□□□□□ -1.51
CNOT4O95628 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.59□□□□□ -1.51
CNOT4O95628 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.59□□□□□ -1.51
CNOT4O95628 OR4D12P-201ENST00000509361 911 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AC079395.1-201ENST00000510981 262 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AC109471.1-201ENST00000511631 612 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.59□□□□□ -1.51
CNOT4O95628 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.59□□□□□ -1.51
CNOT4O95628 NPM1P6-201ENST00000521088 871 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 IGKV3D-34-201ENST00000522638 302 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.59□□□□□ -1.51
CNOT4O95628 AC118273.2-201ENST00000532092 465 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AP002812.4-201ENST00000532139 286 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.59□□□□□ -1.51
CNOT4O95628 OR4A43P-201ENST00000532938 908 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.59□□□□□ -1.51
CNOT4O95628 ADI1P3-201ENST00000549509 470 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.59□□□□□ -1.51
CNOT4O95628 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.59□□□□□ -1.51
CNOT4O95628 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.59□□□□□ -1.51
CNOT4O95628 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.59□□□□□ -1.51
CNOT4O95628 AC009120.3-201ENST00000563335 499 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.59□□□□□ -1.51
CNOT4O95628 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.59□□□□□ -1.51
CNOT4O95628 AC005332.4-201ENST00000592752 579 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AP000238.1-201ENST00000608759 426 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.59□□□□□ -1.51
CNOT4O95628 AC004836.1-201ENST00000623032 634 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AF001550.2-201ENST00000636643 217 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 AC099654.10-201ENST00000640395 161 ntBASIC5.59□□□□□ -1.51
CNOT4O95628 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CNOT4O95628 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNOT4O95628 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.52
CNOT4O95628 AL355377.1-201ENST00000621125 1653 ntBASIC5.59□□□□□ -1.52
CNOT4O95628 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CNOT4O95628 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms