Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.63□□□□□ -1.67
PDLIM1O00151 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.63□□□□□ -1.67
PDLIM1O00151 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.63□□□□□ -1.67
PDLIM1O00151 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.63□□□□□ -1.67
PDLIM1O00151 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.63□□□□□ -1.67
PDLIM1O00151 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
PDLIM1O00151 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM1O00151 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PDLIM1O00151 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
PDLIM1O00151 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM1O00151 ZNF733P-202ENST00000444809 1573 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM1O00151 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM1O00151 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.62□□□□□ -1.67
PDLIM1O00151 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM1O00151 AC103591.2-201ENST00000265259 766 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM1O00151 SNORA73.1-201ENST00000363107 205 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 RNU6-1251P-201ENST00000364502 107 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PDLIM1O00151 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PDLIM1O00151 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PDLIM1O00151 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.62□□□□□ -1.67
PDLIM1O00151 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.62□□□□□ -1.67
PDLIM1O00151 RNF19BPX-201ENST00000426224 625 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.62□□□□□ -1.67
PDLIM1O00151 AL627308.1-201ENST00000435693 821 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.62□□□□□ -1.67
PDLIM1O00151 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.62□□□□□ -1.67
PDLIM1O00151 EEF1B2P5-201ENST00000444820 548 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 TDGF1P1-201ENST00000445734 527 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 CCRL1P1-201ENST00000449542 1053 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 AC008953.1-201ENST00000497334 318 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 AC139783.2-201ENST00000504847 1145 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.62□□□□□ -1.67
PDLIM1O00151 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.62□□□□□ -1.67
PDLIM1O00151 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.62□□□□□ -1.67
PDLIM1O00151 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.62□□□□□ -1.67
PDLIM1O00151 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.62□□□□□ -1.67
PDLIM1O00151 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.62□□□□□ -1.67
PDLIM1O00151 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.62□□□□□ -1.67
PDLIM1O00151 AC100770.1-201ENST00000532310 322 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.62□□□□□ -1.67
PDLIM1O00151 AP006289.1-201ENST00000538089 277 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM1O00151 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.62□□□□□ -1.67
PDLIM1O00151 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.62□□□□□ -1.67
PDLIM1O00151 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM1O00151 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.62□□□□□ -1.67
PDLIM1O00151 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.62□□□□□ -1.67
PDLIM1O00151 RPSAP73-201ENST00000614820 330 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.62□□□□□ -1.67
PDLIM1O00151 AC015804.1-201ENST00000622935 435 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 AC015908.5-201ENST00000623289 343 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 AL359715.5-201ENST00000623431 443 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 AC135068.12-201ENST00000637370 931 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM1O00151 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM1O00151 MAPK10-253ENST00000641010 4072 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PDLIM1O00151 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
PDLIM1O00151 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM1O00151 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.62□□□□□ -1.67
PDLIM1O00151 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
PDLIM1O00151 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM1O00151 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
PDLIM1O00151 MAPK10-304ENST00000641341 3984 ntBASIC4.62□□□□□ -1.67
PDLIM1O00151 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM1O00151 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.61□□□□□ -1.67
PDLIM1O00151 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.61□□□□□ -1.67
PDLIM1O00151 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.61□□□□□ -1.67
PDLIM1O00151 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.61□□□□□ -1.67
PDLIM1O00151 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PDLIM1O00151 C4BPAP1-201ENST00000415474 1893 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 OR5T3-201ENST00000303059 1023 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PDLIM1O00151 SNORA70-201ENST00000384436 135 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 SNORD65-201ENST00000391079 73 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 AL589655.1-201ENST00000405398 482 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 MIR1182-201ENST00000408363 97 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 RNU4-34P-201ENST00000410431 124 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 DPPA2P3-201ENST00000411853 655 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 AL356806.1-201ENST00000422524 916 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 AC093698.1-201ENST00000423843 571 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 RPS4XP16-201ENST00000427198 791 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 AC022022.1-201ENST00000430304 178 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 TRIM60P13-201ENST00000432350 1283 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.61□□□□□ -1.67
PDLIM1O00151 EEF1A1P1-201ENST00000447052 739 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 MYO5BP2-201ENST00000449815 1277 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms