Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC093719.1-202ENST00000392735 373 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 NUDT19P3-201ENST00000404698 555 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 USP9YP14-201ENST00000430663 563 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC010153.1-201ENST00000432862 727 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 GAPDHP59-201ENST00000435908 267 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 GTF2IP7-202ENST00000436677 309 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 MTCO2P16-201ENST00000436962 677 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 RPL7P29-201ENST00000437151 728 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 MTND3P1-201ENST00000441336 220 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 PPIAP7-201ENST00000454070 489 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC092865.4-201ENST00000477936 615 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 RN7SL170P-201ENST00000487098 295 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 RPL37P23-201ENST00000492641 294 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 RN7SL362P-201ENST00000494228 267 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 MTCO3P7-201ENST00000510008 774 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AP000620.1-201ENST00000527147 504 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AL078601.3-201ENST00000573303 535 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 SS18L2P2-201ENST00000583960 235 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC064872.1-201ENST00000604823 1072 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 BNIP3P4-201ENST00000604946 565 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC010738.1-201ENST00000604970 987 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC096553.1-201ENST00000605169 829 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC068792.1-201ENST00000621354 417 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC073592.6-201ENST00000624271 415 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC073593.1-201ENST00000624500 411 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC073488.3-201ENST00000631611 778 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 MIR4278-201ENST00000636094 69 ntBASIC6.15□□□□□ -1.42
CCDC66A2RUB6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.15□□□□□ -1.43
CCDC66A2RUB6 AC004817.4-201ENST00000602396 3625 ntBASIC6.15□□□□□ -1.43
CCDC66A2RUB6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC66A2RUB6 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC66A2RUB6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC66A2RUB6 NEAT1-202ENST00000501122 22743 ntBASIC6.15□□□□□ -1.43
CCDC66A2RUB6 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC66A2RUB6 AC107021.2-201ENST00000567714 2095 ntBASIC6.14□□□□□ -1.43
CCDC66A2RUB6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC66A2RUB6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
CCDC66A2RUB6 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC66A2RUB6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC66A2RUB6 CCT8P1-201ENST00000413611 1657 ntBASIC6.14□□□□□ -1.43
CCDC66A2RUB6 AC003973.3-201ENST00000624863 2822 ntBASIC6.14□□□□□ -1.43
CCDC66A2RUB6 MFSD8-239ENST00000641590 2479 ntBASIC6.14□□□□□ -1.43
CCDC66A2RUB6 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC66A2RUB6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC66A2RUB6 RNU6-707P-201ENST00000364647 95 ntBASIC6.14□□□□□ -1.43
CCDC66A2RUB6 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC66A2RUB6 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC66A2RUB6 YWHAZP6-201ENST00000399764 738 ntBASIC6.14□□□□□ -1.43
CCDC66A2RUB6 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC66A2RUB6 AL034374.1-201ENST00000406329 351 ntBASIC6.14□□□□□ -1.43
CCDC66A2RUB6 RNU6-648P-201ENST00000410190 107 ntBASIC6.14□□□□□ -1.43
CCDC66A2RUB6 RNU6-757P-201ENST00000410334 100 ntBASIC6.14□□□□□ -1.43
CCDC66A2RUB6 AC002524.1-201ENST00000411687 547 ntBASIC6.14□□□□□ -1.43
CCDC66A2RUB6 AL035422.1-201ENST00000414193 397 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms