Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 GLRXP2-201ENST00000555594 321 ntBASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC018552.1-201ENST00000562099 811 ntBASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 RN7SL690P-201ENST00000582087 240 ntBASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC209154.1-201ENST00000582156 337 ntBASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC069061.3-201ENST00000582254 823 ntBASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC073137.1-201ENST00000605636 634 ntBASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC008966.2-201ENST00000606157 453 ntBASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC026979.4-201ENST00000606555 645 ntBASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AL731566.2-201ENST00000618971 317 ntBASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 MFSD8-242ENST00000641690 4199 ntBASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TCRBV4S1A1TA0A5B7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AL031119.1-201ENST00000404707 1879 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 VDAC2P1-201ENST00000399358 958 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AL121834.1-202ENST00000404494 277 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC140479.3-201ENST00000418944 1126 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 RPL21P43-201ENST00000425440 472 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC079168.2-201ENST00000453977 416 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC090142.1-201ENST00000465776 462 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC012158.1-204ENST00000483430 465 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC113430.1-201ENST00000506872 718 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 STMN1P2-201ENST00000508435 439 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 RNU6-1334P-201ENST00000516032 105 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 IGKV2D-10-201ENST00000520194 281 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AP000859.1-201ENST00000525536 307 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 MIR4697-201ENST00000582977 78 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 MIR5096-201ENST00000583713 70 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 SLC25A36P1-201ENST00000590111 465 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC009237.17-201ENST00000618111 748 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 MIR6810-201ENST00000622701 70 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC002044.3-201ENST00000623314 541 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 ZNF137P-201ENST00000456718 1920 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 ICE2P1-201ENST00000512800 1849 ntBASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.67□□□□□ -1.82
TCRBV4S1A1TA0A5B7 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 RPL32P3-201ENST00000359025 275 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 SNORA70F-201ENST00000384142 135 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 RPL12P28-201ENST00000430852 489 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 RN7SL385P-201ENST00000468873 276 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 OR52A4P-201ENST00000472867 958 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 AC104763.1-201ENST00000475274 360 ntBASIC3.66□□□□□ -1.82
TCRBV4S1A1TA0A5B7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms