Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
SHANK2Q9UPX8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SHANK2Q9UPX8 AC104260.2-201ENST00000623551 3497 ntBASIC6.62□□□□□ -1.35
SHANK2Q9UPX8 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SHANK2Q9UPX8 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
SHANK2Q9UPX8 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
SHANK2Q9UPX8 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SHANK2Q9UPX8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SHANK2Q9UPX8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
SHANK2Q9UPX8 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SHANK2Q9UPX8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 AC097374.1-203ENST00000400783 485 ntBASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 PGBD4P4-201ENST00000509673 613 ntBASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 FAM27D1-201ENST00000612308 341 ntBASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 MIR8059-201ENST00000620427 81 ntBASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 CDRT1-208ENST00000630868 794 ntBASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 AC083837.1-201ENST00000565297 2994 ntBASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHANK2Q9UPX8 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 RNU1-83P-201ENST00000363426 164 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 RN7SKP159-201ENST00000410657 292 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AC062016.2-201ENST00000420950 676 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 RPL21P89-201ENST00000444021 467 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AC012671.1-201ENST00000451912 203 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AC138832.1-201ENST00000522871 556 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AC091178.1-203ENST00000584586 279 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AL161729.3-201ENST00000603533 673 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AC005858.4-201ENST00000623191 700 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AL161912.2-201ENST00000565707 3007 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 MAPK10-286ENST00000641208 8747 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 EIF4A1P3-201ENST00000411521 244 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 SNRPFP1-201ENST00000414761 252 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AL356095.1-201ENST00000417217 199 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 ARAFP1-201ENST00000422172 605 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 MTCO1P54-201ENST00000430139 712 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 RPS27AP17-201ENST00000463344 455 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AC091564.1-201ENST00000464563 479 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 SNRPCP3-201ENST00000474888 476 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AC108064.1-201ENST00000513791 460 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 RPL23AP97-201ENST00000568955 471 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 AC010547.7-201ENST00000570323 333 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 MIR4286-201ENST00000580651 93 ntBASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHANK2Q9UPX8 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHANK2Q9UPX8 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
SHANK2Q9UPX8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHANK2Q9UPX8 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHANK2Q9UPX8 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
SHANK2Q9UPX8 RNA5SP307-201ENST00000362863 116 ntBASIC6.59□□□□□ -1.36
SHANK2Q9UPX8 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.59□□□□□ -1.36
SHANK2Q9UPX8 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.59□□□□□ -1.36
SHANK2Q9UPX8 MFSD13B-201ENST00000420133 1290 ntBASIC6.59□□□□□ -1.36
SHANK2Q9UPX8 AL157831.1-201ENST00000426134 473 ntBASIC6.59□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms