Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 AC108471.1-201ENST00000513977 287 ntBASIC4.88□□□□□ -1.63
SPASTQ9UBP0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 AC067805.1-201ENST00000559344 470 ntBASIC4.88□□□□□ -1.63
SPASTQ9UBP0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 AL512782.1-201ENST00000603093 364 ntBASIC4.88□□□□□ -1.63
SPASTQ9UBP0 AC018695.5-201ENST00000605872 315 ntBASIC4.88□□□□□ -1.63
SPASTQ9UBP0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 uc_338.18-201ENST00000615451 175 ntBASIC4.88□□□□□ -1.63
SPASTQ9UBP0 AC108359.1-201ENST00000616451 1211 ntBASIC4.88□□□□□ -1.63
SPASTQ9UBP0 BX005214.3-202ENST00000619809 325 ntBASIC4.88□□□□□ -1.63
SPASTQ9UBP0 AC019206.1-201ENST00000621938 425 ntBASIC4.88□□□□□ -1.63
SPASTQ9UBP0 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SPASTQ9UBP0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AL022393.1-201ENST00000625142 1677 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 RNU6-666P-201ENST00000363499 107 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 RN7SKP224-201ENST00000364140 325 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 RNU6-31P-201ENST00000384388 108 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 RPS16P5-201ENST00000406501 404 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 FAR2P2-201ENST00000413041 594 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 TRGV6-201ENST00000417928 299 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AL590609.2-201ENST00000421430 368 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 FAR2P4-202ENST00000425399 584 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 RPL34P6-201ENST00000432390 345 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AC093414.1-201ENST00000434712 514 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 MRPS33P4-201ENST00000434892 317 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AC092013.1-201ENST00000438795 332 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 ELOCP10-201ENST00000440624 327 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AC245517.2-201ENST00000442890 346 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AC023512.1-201ENST00000444513 499 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 RSL24D1P2-201ENST00000445584 366 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AC008897.1-201ENST00000494006 347 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 CEACAMP10-202ENST00000495431 496 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 RNU6-760P-201ENST00000516078 97 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AC012339.2-201ENST00000523996 453 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AC234771.5-201ENST00000600161 514 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AC123786.2-201ENST00000603459 275 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AC020910.3-201ENST00000603701 874 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 ELOCP34-201ENST00000604436 327 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 OR5AC4P-202ENST00000642086 985 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 ZNF652P1-201ENST00000442420 1309 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AC009229.4-201ENST00000623854 1947 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 OR51C1P-202ENST00000641159 1444 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AP001642.1-201ENST00000624727 2117 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SPASTQ9UBP0 ECM1P2-201ENST00000503354 1577 ntBASIC4.87□□□□□ -1.63
SPASTQ9UBP0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.86□□□□□ -1.63
SPASTQ9UBP0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SPASTQ9UBP0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SPASTQ9UBP0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SPASTQ9UBP0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms