Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC005294.1-201ENST00000355509 281 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 Y_RNA.22-201ENST00000362492 102 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 RNU6-637P-201ENST00000384050 107 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 TRAV8-6-201ENST00000390443 561 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AL136372.1-201ENST00000403060 228 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AL356967.1-201ENST00000406305 431 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 RNU4-26P-201ENST00000410270 107 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 SNRPGP11-201ENST00000411777 232 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC106017.1-202ENST00000424109 428 ntTSL 5 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC011998.2-201ENST00000430884 473 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC007952.3-202ENST00000435028 428 ntTSL 5 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AL392003.2-201ENST00000451015 679 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 ASS1P12-201ENST00000452496 1227 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC005008.1-201ENST00000456151 612 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC021660.1-201ENST00000465006 554 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC006967.1-201ENST00000467608 589 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 RN7SL189P-201ENST00000468631 289 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 RPL36P16-201ENST00000496996 306 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 HMGB1P41-201ENST00000520234 440 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC105029.1-201ENST00000520250 669 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AL133271.1-201ENST00000538229 291 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 CR383656.7-201ENST00000548164 174 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC092375.1-201ENST00000550410 637 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC127381.1-201ENST00000555979 939 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 LINC00635-210ENST00000600240 714 ntTSL 5 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC104117.5-201ENST00000606195 547 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AL121928.1-201ENST00000608017 521 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AL031666.3-201ENST00000609320 1006 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 GZMB-209ENST00000616551 559 ntTSL 2 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 MIR6505-201ENST00000617206 71 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AP000769.3-201ENST00000622944 536 ntTSL 3 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AL353898.2-201ENST00000623000 255 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 U6.114-201ENST00000636407 96 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC000374.1-201ENST00000434698 1745 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 LINC01963-201ENST00000562038 3148 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC232271.1-201ENST00000602455 2715 ntBASIC9.02□□□□□ -0.97
RTN4Q9NQC3 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
RTN4Q9NQC3 AL591848.4-201ENST00000567832 3472 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 MTND4P14-201ENST00000435799 1354 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 RNA5SP145-201ENST00000363124 125 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 AL133343.1-201ENST00000375670 846 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 TXNP7-201ENST00000406296 293 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 MIR1296-201ENST00000408136 92 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 RN7SKP136-201ENST00000410927 300 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 MTND3P8-201ENST00000412909 339 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 RANP6-201ENST00000413691 644 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 OR6C66P-201ENST00000414917 930 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 OR1AA1P-201ENST00000419597 916 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 SAR1AP4-201ENST00000429225 591 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 IFNA20P-201ENST00000436840 528 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 RPS4XP19-201ENST00000460237 736 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 RPS27AP1-201ENST00000475545 471 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 AC244505.1-201ENST00000502642 307 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 AC106800.3-201ENST00000511389 308 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC9.01□□□□□ -0.97
RTN4Q9NQC3 RNU7-30P-201ENST00000516835 62 ntBASIC9.01□□□□□ -0.97
RTN4Q9NQC3 IGKV2D-36-201ENST00000518643 226 ntBASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms