Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TRGV7-201ENST00000427089 353 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 AC092647.3-201ENST00000443044 633 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 COPS8P2-201ENST00000473228 627 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 AC113430.1-201ENST00000506872 718 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 AC013701.1-201ENST00000522657 465 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 CYP4A43P-201ENST00000568156 121 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 RN7SL652P-201ENST00000577769 300 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 BNIP3P32-201ENST00000600015 554 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 AC010201.1-201ENST00000605051 540 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 GMCL1P2-201ENST00000605230 823 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 RPL21P136-201ENST00000605378 396 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 AL139254.3-201ENST00000641097 674 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 AC139769.1-204ENST00000472297 1931 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 LAP3P1-201ENST00000403648 294 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 RAD1P2-201ENST00000446414 663 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 MTCYBP14-201ENST00000457471 715 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AC104763.1-201ENST00000475274 360 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 NIP7P2-201ENST00000485801 544 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AC109462.1-201ENST00000491087 368 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 SCARNA21.2-201ENST00000516600 166 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AC007225.2-201ENST00000562529 256 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 VN1R81P-201ENST00000602085 372 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 KATNBL1P1-201ENST00000605192 748 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 MIR6768-201ENST00000610734 72 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AL356094.1-201ENST00000624663 1212 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AC004808.2-201ENST00000627965 773 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 HPVC1-201ENST00000629899 1198 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AL163152.1-201ENST00000642001 374 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AC092111.2-201ENST00000611627 1414 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AC108467.2-201ENST00000617640 1597 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 AC011503.2-201ENST00000594230 1500 ntBASIC5.53□□□□□ -1.52
UPF2Q9HAU5 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPF2Q9HAU5 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 RNA5SP52-201ENST00000362448 134 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AL121834.1-202ENST00000404494 277 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.52□□□□□ -1.53
UPF2Q9HAU5 AC106901.1-201ENST00000425086 698 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 CDY14P-201ENST00000431260 1014 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 CDY12P-201ENST00000440679 1015 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 CNOT7P2-201ENST00000441051 832 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 CDY13P-201ENST00000445813 1015 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 CDY23P-201ENST00000451661 1014 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 DDX39BP2-208ENST00000453923 258 ntBASIC5.52□□□□□ -1.53
UPF2Q9HAU5 RPL5P30-201ENST00000465511 891 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms