Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL590240.1-201ENST00000334118 313 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 RNU6-386P-201ENST00000362650 107 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 RNU4-7P-201ENST00000364758 141 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 VDAC1P9-201ENST00000412766 841 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 PPIAP13-201ENST00000434706 478 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 AL935212.3-201ENST00000450729 284 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 AC104763.1-201ENST00000475274 360 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 AC109635.6-201ENST00000525487 1113 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 MIR4270-201ENST00000581799 70 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 AP001542.1-201ENST00000591314 200 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 AC104785.1-201ENST00000603220 588 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 AC004232.3-201ENST00000622977 525 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 MFSD8-216ENST00000641147 4009 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 HSPD1P14-201ENST00000432666 1618 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 ZNF137P-201ENST00000456718 1920 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 EOGT-210ENST00000615922 1931 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 AL672167.1-203ENST00000641299 2975 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 Z98745.1-201ENST00000402553 494 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 RPL5P19-201ENST00000404228 893 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 RN7SKP247-201ENST00000411094 308 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 RPL37P18-201ENST00000411602 243 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 AC007686.1-201ENST00000488511 463 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 AC091917.2-201ENST00000505002 744 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 BTG4P1-201ENST00000510421 183 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 OR5M2P-201ENST00000529003 936 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 CD24P2-201ENST00000565486 219 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 AC027281.1-201ENST00000574178 758 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 RN7SL690P-201ENST00000582087 240 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 RPL7P50-201ENST00000600588 727 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 AC012213.4-201ENST00000606457 354 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 AC007620.3-201ENST00000608131 497 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 AP001002.1-201ENST00000625148 1513 ntBASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCSER1Q9C0I3 HSPA8P17-201ENST00000427029 1382 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 Z95327.2-201ENST00000414579 1873 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 AC079741.1-201ENST00000321498 212 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 RNA5SP151-201ENST00000365632 117 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 BMS1P3-201ENST00000372011 932 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 HMGB1P32-201ENST00000425971 565 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 YWHAZP2-201ENST00000440317 728 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 RPL31P20-201ENST00000449593 360 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 AL133244.1-201ENST00000456007 258 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 ATP5G1P3-201ENST00000463301 410 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 AC006967.1-201ENST00000467608 589 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 STRADBP1-201ENST00000478954 1281 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 MTND4LP2-201ENST00000502312 285 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms