Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 NDUFA5P12-201ENST00000503796 343 ntBASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 EIF3KP3-201ENST00000514461 639 ntBASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 AL358913.1-201ENST00000554342 121 ntBASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 AC022884.3-201ENST00000579571 248 ntBASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 AC010503.3-201ENST00000594355 540 ntBASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 AC112220.2-201ENST00000605513 533 ntBASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 AL122125.1-201ENST00000616999 600 ntBASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 AC090510.2-201ENST00000617465 629 ntBASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 FRG1HP-204ENST00000617940 757 ntBASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 AC018445.2-201ENST00000622987 260 ntBASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 AL078595.3-201ENST00000623815 1166 ntBASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 AC097520.1-201ENST00000624435 385 ntBASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 AC139713.2-210ENST00000641741 992 ntBASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHMP4CQ96CF2 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 OR9G4-201ENST00000302957 984 ntBASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 MIR105-1-201ENST00000385222 81 ntBASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 RNU4-34P-201ENST00000410431 124 ntBASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AC007394.1-201ENST00000421941 531 ntBASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AL161722.2-201ENST00000434731 981 ntBASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 FTH1P16-201ENST00000435241 552 ntBASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AC058823.1-201ENST00000485315 474 ntBASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 RNA5SP230-201ENST00000517039 122 ntBASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 LRRC6P1-201ENST00000532188 885 ntBASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 ATP5F1P7-201ENST00000567330 760 ntBASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AC009852.2-201ENST00000567898 485 ntBASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 BX323046.1-201ENST00000610145 535 ntBASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AL121890.3-201ENST00000618494 516 ntBASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AC099654.6-201ENST00000636487 512 ntBASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.3□□□□□ -1.4
CHMP4CQ96CF2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 SEC63P2-201ENST00000503863 1939 ntBASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 ZNF29P-201ENST00000225587 168 ntBASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 SNORA74A-201ENST00000364089 198 ntBASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 DUTP5-201ENST00000406790 469 ntBASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 COX5BP7-201ENST00000414780 274 ntBASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 TCEA1P4-201ENST00000415066 844 ntBASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.29□□□□□ -1.4
CHMP4CQ96CF2 SLC35E1P1-201ENST00000419313 864 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms