Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.98□□□□□ -1.77
AP3S1Q92572 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.98□□□□□ -1.77
AP3S1Q92572 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S1Q92572 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S1Q92572 RN7SKP44-201ENST00000363602 316 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 SNORA74A-201ENST00000364089 198 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 RNA5SP513-201ENST00000364648 118 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 PPCS-201ENST00000372556 984 ntTSL 2 BASIC3.98□□□□□ -1.77
AP3S1Q92572 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
AP3S1Q92572 AL591848.1-201ENST00000413092 322 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 RPL34P20-201ENST00000442771 351 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC3.98□□□□□ -1.77
AP3S1Q92572 H2AFZP5-201ENST00000446960 382 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.98□□□□□ -1.77
AP3S1Q92572 EIF4A1P6-201ENST00000448133 1210 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.98□□□□□ -1.77
AP3S1Q92572 DDX39BP2-208ENST00000453923 258 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 AC079168.2-201ENST00000453977 416 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 ISCUP1-201ENST00000454451 448 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 AC079804.1-201ENST00000461922 436 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.98□□□□□ -1.77
AP3S1Q92572 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.98□□□□□ -1.77
AP3S1Q92572 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
AP3S1Q92572 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.98□□□□□ -1.77
AP3S1Q92572 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.98□□□□□ -1.77
AP3S1Q92572 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC3.98□□□□□ -1.77
AP3S1Q92572 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.98□□□□□ -1.77
AP3S1Q92572 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC3.98□□□□□ -1.77
AP3S1Q92572 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.98□□□□□ -1.77
AP3S1Q92572 AC022726.1-201ENST00000587475 207 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 MIR432-201ENST00000606207 94 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 AC108865.2-201ENST00000606881 432 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 AC096586.2-201ENST00000610260 441 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 AC007497.1-201ENST00000610421 561 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 AC078899.5-201ENST00000612475 178 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 AC007546.2-201ENST00000623996 360 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
AP3S1Q92572 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
AP3S1Q92572 KARSP3-201ENST00000571212 1504 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S1Q92572 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.98□□□□□ -1.77
AP3S1Q92572 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S1Q92572 IQCB2P-201ENST00000401788 1633 ntBASIC3.98□□□□□ -1.77
AP3S1Q92572 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.98□□□□□ -1.77
AP3S1Q92572 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S1Q92572 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
AP3S1Q92572 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S1Q92572 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
AP3S1Q92572 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S1Q92572 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S1Q92572 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S1Q92572 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S1Q92572 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S1Q92572 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S1Q92572 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.97□□□□□ -1.77
AP3S1Q92572 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.97□□□□□ -1.77
AP3S1Q92572 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
AP3S1Q92572 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S1Q92572 RNU1-82P-201ENST00000390851 165 ntBASIC3.97□□□□□ -1.77
AP3S1Q92572 SNORA74C-2-201ENST00000411179 201 ntBASIC3.97□□□□□ -1.77
AP3S1Q92572 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AC092647.2-201ENST00000452998 253 ntBASIC3.97□□□□□ -1.77
AP3S1Q92572 RPL23AP56-201ENST00000460778 453 ntBASIC3.97□□□□□ -1.77
AP3S1Q92572 RPL7P39-201ENST00000481157 744 ntBASIC3.97□□□□□ -1.77
AP3S1Q92572 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S1Q92572 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.97□□□□□ -1.77
AP3S1Q92572 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S1Q92572 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.97□□□□□ -1.77
AP3S1Q92572 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S1Q92572 MAPK10-373ENST00000641983 6772 ntBASIC3.97□□□□□ -1.77
AP3S1Q92572 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
AP3S1Q92572 AC139769.1-204ENST00000472297 1931 ntBASIC3.97□□□□□ -1.77
AP3S1Q92572 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
AP3S1Q92572 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S1Q92572 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
AP3S1Q92572 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
AP3S1Q92572 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
AP3S1Q92572 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
AP3S1Q92572 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.96□□□□□ -1.78
AP3S1Q92572 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
AP3S1Q92572 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC3.96□□□□□ -1.78
AP3S1Q92572 RNA5SP284-201ENST00000384547 118 ntBASIC3.96□□□□□ -1.78
AP3S1Q92572 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
AP3S1Q92572 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.96□□□□□ -1.78
AP3S1Q92572 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms