Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF4Q92544 RNA5SP87-201ENST00000384155 118 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 MIR192-201ENST00000384915 110 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AL021331.1-201ENST00000402817 582 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 CHEK2P3-201ENST00000416118 248 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 RPL34P6-201ENST00000432390 345 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF4Q92544 RAB28P3-201ENST00000448325 597 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 RN7SL189P-201ENST00000468631 289 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 RN7SL860P-201ENST00000473738 223 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 NPM1P29-201ENST00000483112 803 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 RPL7P41-201ENST00000485823 957 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 OR9N1P-202ENST00000494289 481 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC093770.1-201ENST00000511559 571 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 MTCO3P27-201ENST00000514397 196 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 AL671862.1-201ENST00000515851 349 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 C1DP5-201ENST00000525775 383 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF4Q92544 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC008033.2-201ENST00000542626 177 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AL121594.4-201ENST00000556211 1196 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC233266.2-201ENST00000567067 528 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC087783.2-201ENST00000605070 562 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC034236.3-201ENST00000605999 461 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC112503.2-201ENST00000609005 552 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC005156.1-201ENST00000613371 573 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 AL645927.2-201ENST00000618350 349 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 AL445984.1-201ENST00000637834 659 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AL731566.1-201ENST00000620490 1937 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF4Q92544 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AP001642.1-201ENST00000624727 2117 ntBASIC4.75□□□□□ -1.65
TM9SF4Q92544 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 AC097461.1-201ENST00000568928 2821 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF4Q92544 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF4Q92544 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF4Q92544 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF4Q92544 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF4Q92544 RN7SKP114-201ENST00000410327 279 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 RNU2-50P-201ENST00000410494 143 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 AC016397.1-201ENST00000412463 242 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 FAR2P2-201ENST00000413041 594 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 OR13Z1P-201ENST00000416141 834 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 MTCO2P17-201ENST00000424336 677 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 FAR2P4-202ENST00000425399 584 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 AC007563.3-201ENST00000433233 371 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF4Q92544 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 AC006326.1-201ENST00000445465 787 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 RN7SL738P-201ENST00000470264 297 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 AC108729.1-201ENST00000487812 947 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 AC105233.1-201ENST00000498840 781 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 OR51K1P-201ENST00000510214 950 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 AC034244.2-201ENST00000514668 858 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 AC093014.1-201ENST00000548926 724 ntBASIC4.74□□□□□ -1.65
TM9SF4Q92544 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF4Q92544 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.74□□□□□ -1.65
TM9SF4Q92544 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms