Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 AC011270.1-201ENST00000558606 583 ntBASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 AC209154.1-201ENST00000582156 337 ntBASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 ELOCP28-201ENST00000590044 317 ntBASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 AC005520.3-201ENST00000602874 370 ntBASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 AL445222.1-201ENST00000607259 628 ntBASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 SNORD91B-202ENST00000608459 222 ntBASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 OR7M1P-201ENST00000608946 533 ntBASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 AP003400.2-201ENST00000624036 666 ntBASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 CR381572.2-201ENST00000624852 397 ntBASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 AL355852.1-201ENST00000454081 1771 ntBASIC4.48□□□□□ -1.69
CLHC1Q8NHS4 AC109780.1-201ENST00000451768 1344 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AL589647.1-201ENST00000402485 466 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 DPPA2P3-201ENST00000411853 655 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AC004690.1-201ENST00000418216 328 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 RPL12P28-201ENST00000430852 489 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AC134698.5-201ENST00000519444 336 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 IGLV2-28-201ENST00000520681 304 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AC087763.1-201ENST00000603391 286 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AC090953.1-201ENST00000604305 1092 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AC010200.2-201ENST00000605098 235 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 BX323046.1-201ENST00000610145 535 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AC011815.3-201ENST00000624194 473 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 AL133243.3-201ENST00000617415 3004 ntBASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CLHC1Q8NHS4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CLHC1Q8NHS4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CLHC1Q8NHS4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CLHC1Q8NHS4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 AL031119.1-201ENST00000404707 1879 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 RNA5SP305-201ENST00000362665 119 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 RNA5SP507-201ENST00000363603 121 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 OR51B3P-201ENST00000412287 913 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 AL450992.3-201ENST00000413192 568 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 RN7SL629P-201ENST00000489622 285 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 GAPDHP56-201ENST00000506031 988 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 AC147055.3-201ENST00000510547 851 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 RNU1-6P-201ENST00000516290 144 ntBASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.46□□□□□ -1.7
CLHC1Q8NHS4 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms