Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 MTCO3P21-201ENST00000430791 643 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 RPS29P9-201ENST00000440360 171 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 TXNP5-201ENST00000441043 315 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 HMGB1P4-201ENST00000455362 567 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC103987.1-201ENST00000473394 348 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC011005.3-201ENST00000491624 395 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC016550.3-201ENST00000515706 767 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 RNU6-1308P-201ENST00000516817 103 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC022884.3-201ENST00000579571 248 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC020910.3-201ENST00000603701 874 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC108359.1-201ENST00000616451 1211 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC092376.2-201ENST00000622621 4116 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC008079.2-201ENST00000623543 20396 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 MFSD8-216ENST00000641147 4009 ntBASIC4.99□□□□□ -1.61
HDDC3Q8N4P3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 MFSD8-220ENST00000641243 1422 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 RNA5SP332-201ENST00000391063 115 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 RNU6-603P-201ENST00000411403 107 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 HYALP1-201ENST00000417674 1279 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 AC093414.1-201ENST00000434712 514 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 MTCYBP21-201ENST00000443300 1113 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 APOOP2-201ENST00000461561 539 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 AC005412.2-201ENST00000492004 341 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 RN7SL441P-201ENST00000492388 296 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 AC016559.2-201ENST00000510759 359 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 AL110118.1-201ENST00000553543 400 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 AC018552.3-201ENST00000567416 561 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 AC092653.1-201ENST00000608509 531 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 AC116447.1-201ENST00000613153 453 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 AC019206.1-201ENST00000621938 425 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 ECM1P2-201ENST00000503354 1577 ntBASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
HDDC3Q8N4P3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 AC011155.1-201ENST00000316512 456 ntBASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 RNU6-31P-201ENST00000384388 108 ntBASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 GTF2IP5-201ENST00000414608 731 ntBASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 AL512504.1-201ENST00000415494 778 ntBASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 RPS20P1-201ENST00000434853 354 ntBASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 SLC25A18P1-201ENST00000449385 454 ntBASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 OR52E3P-201ENST00000452083 936 ntBASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 RNU6-1218P-201ENST00000458990 108 ntBASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 AC111000.3-201ENST00000508057 576 ntBASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.97□□□□□ -1.61
HDDC3Q8N4P3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms