Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 PPBPP1-201ENST00000510807 373 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AC107918.3-201ENST00000533272 382 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 MIR4675-201ENST00000577898 77 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 AC093775.1-201ENST00000624154 1868 ntBASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 OR56B2P-201ENST00000317102 954 ntBASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 AC092642.1-201ENST00000392417 425 ntBASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 BX510359.3-201ENST00000422168 306 ntBASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 AC008410.1-201ENST00000483777 339 ntBASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 OR5M14P-201ENST00000506803 618 ntBASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 AC090281.1-201ENST00000523019 276 ntBASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 AC011487.3-201ENST00000593607 453 ntBASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 AL121873.1-201ENST00000616013 524 ntBASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 AC112694.2-201ENST00000623697 768 ntBASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 RARSP1-201ENST00000542842 1418 ntBASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC50Q8IVM0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 RNA5SP191-201ENST00000362585 102 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 MIR921-201ENST00000401133 56 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 RNU4-34P-201ENST00000410431 124 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 AL355994.1-201ENST00000424379 260 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 CEACAMP7-201ENST00000444105 496 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 SUMO2P1-206ENST00000445436 284 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 OR1H1P-201ENST00000448731 937 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 OR52J1P-201ENST00000450596 932 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 RPS5P7-201ENST00000456664 608 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 SEPT14P1-201ENST00000458703 648 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 AC018638.3-201ENST00000461273 132 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 AC093763.2-201ENST00000505334 1223 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 RN7SKP34-201ENST00000516142 244 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 AC100770.1-201ENST00000532310 322 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 AC005000.1-201ENST00000536192 288 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 HMGN2P6-201ENST00000551091 273 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 AL139395.1-201ENST00000603662 160 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 AC020634.1-201ENST00000608701 549 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 AL031119.1-201ENST00000404707 1879 ntBASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC50Q8IVM0 HSPD1P14-201ENST00000432666 1618 ntBASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms