Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC245389.2-201ENST00000616023 576 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AC242843.1-201ENST00000618702 573 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AC073342.3-201ENST00000624211 193 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AL022322.2-201ENST00000624072 20397 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 GTF2H2B-203ENST00000508065 1432 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 SOCS5P3-201ENST00000425115 1576 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC010329.2-201ENST00000595195 2737 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 IGKV7-3-201ENST00000357453 298 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 RNA5SP123-201ENST00000363244 119 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AL035419.1-201ENST00000397037 564 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AL078599.1-201ENST00000402075 293 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 RNU6-603P-201ENST00000411403 107 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 GJA6P-201ENST00000415117 1042 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 MTND2P11-201ENST00000423638 648 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC092685.1-201ENST00000447960 1243 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 RNA5SP103-201ENST00000459503 118 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 RN7SL244P-201ENST00000493405 297 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC110775.1-201ENST00000513721 462 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 RNU6-1102P-201ENST00000516149 96 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 CIR1P1-201ENST00000524055 1133 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 EDDM3DP-201ENST00000554692 434 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC018695.5-201ENST00000605872 315 ntBASIC5.19□□□□□ -1.58
PRPF39Q86UA1 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF39Q86UA1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 AP001642.1-201ENST00000624727 2117 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 AL450326.2-201ENST00000421913 1962 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 CASC19-221ENST00000641309 1382 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 INTS6P1-201ENST00000504674 2530 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 RN7SKP74-201ENST00000362849 309 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 Y_RNA.110-201ENST00000363220 99 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 RNA5SP455-201ENST00000365190 119 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 OR2AH1P-201ENST00000425717 928 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 RPL34P6-201ENST00000432390 345 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 BX323845.1-201ENST00000432417 179 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 RPS27P5-201ENST00000444247 244 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 CYCSP53-201ENST00000455540 265 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 HMGN2P25-201ENST00000486956 268 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms