Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 AC107977.1-201ENST00000355745 939 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 RN7SKP160-201ENST00000363804 340 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 RPL35AP24-201ENST00000413846 330 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 NPM1P4-201ENST00000414095 812 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 UBTFL3-201ENST00000418934 1024 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 RPL7P11-201ENST00000437586 658 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 FABP3P2-201ENST00000453169 399 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 HIGD1AP8-201ENST00000453927 274 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 UBTFL6-201ENST00000477929 1024 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 RPS26P15-201ENST00000488067 348 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 AC008897.1-201ENST00000494006 347 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 AC092490.3-201ENST00000545370 572 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 AC009101.1-201ENST00000568135 242 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 AC022726.1-201ENST00000587475 207 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 AL353726.1-201ENST00000614041 1000 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 AC018555.1-201ENST00000567548 1980 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 AL451142.2-201ENST00000429076 2090 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC58Q4VC31 MARK2P15-201ENST00000432204 2186 ntBASIC4.12□□□□□ -1.75
CCDC58Q4VC31 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 MIR1286-201ENST00000408112 78 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 RPL23AP25-201ENST00000430973 463 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 RHOT1P3-201ENST00000436571 331 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 RPL12P46-201ENST00000436610 195 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 FAR2P1-206ENST00000449736 709 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 MYO5BP2-201ENST00000449815 1277 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AL645939.1-201ENST00000453429 797 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AL133244.1-201ENST00000456007 258 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 RPL21P71-201ENST00000465598 459 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 SYT14P1-201ENST00000481459 721 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 MRPS33P2-201ENST00000507850 322 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 RNA5SP362-201ENST00000516048 118 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 MIR2114-201ENST00000516645 80 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 IGKV2-18-201ENST00000522607 343 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AC091515.1-201ENST00000548110 679 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AC015911.5-201ENST00000587076 451 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 VN1R79P-201ENST00000593540 513 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AC020914.4-201ENST00000597690 277 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AC023762.1-201ENST00000603280 584 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AC093799.2-201ENST00000610062 578 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AC007529.1-201ENST00000418574 2178 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 FAM35DP-201ENST00000323387 2712 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 AC083899.2-201ENST00000423285 1376 ntBASIC4.11□□□□□ -1.75
CCDC58Q4VC31 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC58Q4VC31 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms