Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MT-RNR1-201ENST00000389680 954 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 RNA5SP105-201ENST00000391123 113 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 RAB9AP4-201ENST00000415230 609 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 TMSB10P2-201ENST00000416049 131 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 OR6C64P-201ENST00000419708 825 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AP001324.1-201ENST00000428553 399 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 RPL35AP21-201ENST00000437667 333 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 RPL23AP93-201ENST00000440847 484 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 Z95152.1-201ENST00000453556 656 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 RPL23AP24-201ENST00000458203 385 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AC109327.1-201ENST00000471666 403 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AC090686.1-201ENST00000481577 749 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AP001960.1-201ENST00000506494 658 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AC113398.2-201ENST00000507630 558 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 RN7SKP21-201ENST00000516503 220 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 DPRXP4-201ENST00000578053 568 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AC023813.4-201ENST00000607580 580 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AL133243.1-201ENST00000614487 366 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AC093535.2-201ENST00000624769 2326 ntBASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHROOM1Q2M3G4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 AL031119.1-201ENST00000404707 1879 ntBASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 MAPK10-349ENST00000641767 3661 ntBASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 RN7SKP74-201ENST00000362849 309 ntBASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 RNU1-130P-201ENST00000363930 160 ntBASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 BTF3P6-201ENST00000448054 499 ntBASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 AL049874.2-201ENST00000492636 288 ntBASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 AC023424.1-201ENST00000496058 459 ntBASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 RNA5SP464-201ENST00000516251 108 ntBASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 CYCSP40-201ENST00000575927 294 ntBASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 AC020634.1-201ENST00000608701 549 ntBASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 NF1P10-201ENST00000613227 742 ntBASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 AC068724.3-201ENST00000625906 87 ntBASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 OR2L1P-202ENST00000641567 1023 ntBASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 AC104118.1-201ENST00000607625 1589 ntBASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHROOM1Q2M3G4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 AC100778.3-201ENST00000580060 1750 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 RN7SKP224-201ENST00000364140 325 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 ST13P16-201ENST00000401760 781 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 U3.35-201ENST00000408405 208 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 VN1R37P-201ENST00000419096 748 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 AC013470.3-201ENST00000420252 1194 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 AC009963.2-201ENST00000453431 138 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 PPIAP21-201ENST00000464473 501 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 AC090142.1-201ENST00000465776 462 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 AL133372.1-201ENST00000493565 745 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 AC010476.1-201ENST00000519111 851 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms