Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL16A1Q07092 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
COL16A1Q07092 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.91□□□□□ -1.46
COL16A1Q07092 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL16A1Q07092 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL16A1Q07092 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL16A1Q07092 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL16A1Q07092 AL590704.1-201ENST00000402856 794 ntBASIC5.91□□□□□ -1.46
COL16A1Q07092 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.91□□□□□ -1.46
COL16A1Q07092 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.91□□□□□ -1.46
COL16A1Q07092 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.91□□□□□ -1.46
COL16A1Q07092 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.91□□□□□ -1.46
COL16A1Q07092 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.91□□□□□ -1.46
COL16A1Q07092 AC024023.1-201ENST00000624530 922 ntBASIC5.91□□□□□ -1.46
COL16A1Q07092 TRIM51GP-201ENST00000534741 1350 ntBASIC5.91□□□□□ -1.46
COL16A1Q07092 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL16A1Q07092 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
COL16A1Q07092 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
COL16A1Q07092 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL16A1Q07092 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL16A1Q07092 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.9□□□□□ -1.46
COL16A1Q07092 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL16A1Q07092 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.9□□□□□ -1.46
COL16A1Q07092 ZNF285B-201ENST00000561698 1767 ntBASIC5.9□□□□□ -1.46
COL16A1Q07092 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.9□□□□□ -1.46
COL16A1Q07092 HMGN2P31-201ENST00000432430 273 ntBASIC5.9□□□□□ -1.46
COL16A1Q07092 NANOGP10-201ENST00000453325 895 ntBASIC5.9□□□□□ -1.46
COL16A1Q07092 AC093166.2-201ENST00000455969 1017 ntBASIC5.9□□□□□ -1.46
COL16A1Q07092 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.9□□□□□ -1.46
COL16A1Q07092 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.9□□□□□ -1.46
COL16A1Q07092 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.9□□□□□ -1.46
COL16A1Q07092 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.9□□□□□ -1.46
COL16A1Q07092 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.9□□□□□ -1.46
COL16A1Q07092 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.9□□□□□ -1.46
COL16A1Q07092 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
COL16A1Q07092 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.9□□□□□ -1.46
COL16A1Q07092 U6.105-201ENST00000637379 88 ntBASIC5.9□□□□□ -1.46
COL16A1Q07092 AP001157.1-201ENST00000550837 2339 ntBASIC5.9□□□□□ -1.47
COL16A1Q07092 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL16A1Q07092 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL16A1Q07092 AL035425.3-201ENST00000564206 4996 ntBASIC5.9□□□□□ -1.47
COL16A1Q07092 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL16A1Q07092 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
COL16A1Q07092 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
COL16A1Q07092 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL16A1Q07092 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.89□□□□□ -1.47
COL16A1Q07092 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL16A1Q07092 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL16A1Q07092 MTND4LP17-201ENST00000414607 293 ntBASIC5.89□□□□□ -1.47
COL16A1Q07092 AC010374.1-201ENST00000503762 1237 ntBASIC5.89□□□□□ -1.47
COL16A1Q07092 KCTD9P2-201ENST00000512203 1013 ntBASIC5.89□□□□□ -1.47
COL16A1Q07092 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.89□□□□□ -1.47
COL16A1Q07092 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.89□□□□□ -1.47
COL16A1Q07092 AC022146.1-201ENST00000595307 847 ntBASIC5.89□□□□□ -1.47
COL16A1Q07092 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL16A1Q07092 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL16A1Q07092 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL16A1Q07092 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL16A1Q07092 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL16A1Q07092 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL16A1Q07092 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
COL16A1Q07092 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL16A1Q07092 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
COL16A1Q07092 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.89□□□□□ -1.47
COL16A1Q07092 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL16A1Q07092 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
COL16A1Q07092 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL16A1Q07092 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
COL16A1Q07092 COX5BP7-201ENST00000414780 274 ntBASIC5.88□□□□□ -1.47
COL16A1Q07092 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.88□□□□□ -1.47
COL16A1Q07092 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.88□□□□□ -1.47
COL16A1Q07092 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.88□□□□□ -1.47
COL16A1Q07092 FAM91A3P-201ENST00000456826 2544 ntBASIC5.88□□□□□ -1.47
COL16A1Q07092 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.88□□□□□ -1.47
COL16A1Q07092 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL16A1Q07092 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COL16A1Q07092 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.88□□□□□ -1.47
COL16A1Q07092 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL16A1Q07092 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL16A1Q07092 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL16A1Q07092 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COL16A1Q07092 OR11H4-201ENST00000315409 1082 ntBASIC5.88□□□□□ -1.47
COL16A1Q07092 MIR34B-201ENST00000385076 84 ntBASIC5.88□□□□□ -1.47
COL16A1Q07092 ATP5F1P4-201ENST00000397288 746 ntBASIC5.88□□□□□ -1.47
COL16A1Q07092 RN7SKP182-201ENST00000410772 298 ntBASIC5.88□□□□□ -1.47
COL16A1Q07092 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.88□□□□□ -1.47
COL16A1Q07092 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.88□□□□□ -1.47
COL16A1Q07092 CYCSP32-201ENST00000440548 321 ntBASIC5.88□□□□□ -1.47
COL16A1Q07092 GAPDHP36-201ENST00000480688 918 ntBASIC5.88□□□□□ -1.47
COL16A1Q07092 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
COL16A1Q07092 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.88□□□□□ -1.47
COL16A1Q07092 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.88□□□□□ -1.47
COL16A1Q07092 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.88□□□□□ -1.47
COL16A1Q07092 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.88□□□□□ -1.47
COL16A1Q07092 AC023762.1-201ENST00000603280 584 ntBASIC5.88□□□□□ -1.47
COL16A1Q07092 AC025175.1-201ENST00000606482 759 ntBASIC5.88□□□□□ -1.47
COL16A1Q07092 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
COL16A1Q07092 AC016588.2-201ENST00000632484 3021 ntBASIC5.88□□□□□ -1.47
COL16A1Q07092 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COL16A1Q07092 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms