Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNA5SP464-201ENST00000516251 108 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AC027308.1-201ENST00000517993 110 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN20P56880 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN20P56880 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.72□□□□□ -1.65
CLDN20P56880 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN20P56880 AL049838.1-201ENST00000563647 981 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN20P56880 MIR3691-201ENST00000578066 90 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.72□□□□□ -1.65
CLDN20P56880 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.72□□□□□ -1.65
CLDN20P56880 AC095055.1-201ENST00000603472 1113 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AL162431.4-201ENST00000604674 411 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.72□□□□□ -1.65
CLDN20P56880 OR2BH1P-201ENST00000608850 864 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AC018445.2-201ENST00000622987 260 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AP000648.2-201ENST00000624182 404 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AC011815.3-201ENST00000624194 473 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AC090506.2-201ENST00000624521 419 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AL590396.4-201ENST00000636779 956 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 AC017007.4-201ENST00000503353 1352 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN20P56880 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLDN20P56880 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.72□□□□□ -1.65
CLDN20P56880 AC021242.1-201ENST00000507315 2035 ntBASIC4.72□□□□□ -1.65
CLDN20P56880 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLDN20P56880 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CLDN20P56880 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
CLDN20P56880 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CLDN20P56880 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN20P56880 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDN20P56880 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLDN20P56880 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDN20P56880 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 OR9G4-201ENST00000302957 984 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLDN20P56880 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDN20P56880 SNORA17.1-201ENST00000362945 126 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 U8.4-201ENST00000363626 134 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 RNU6-452P-201ENST00000384406 107 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 RNU6-185P-201ENST00000384421 107 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 MIR600-201ENST00000385007 98 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLDN20P56880 AC013442.1-201ENST00000397347 228 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDN20P56880 AC105402.1-201ENST00000413336 545 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN20P56880 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN20P56880 MTCO2P17-201ENST00000424336 677 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.71□□□□□ -1.66
CLDN20P56880 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN20P56880 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.71□□□□□ -1.66
CLDN20P56880 CLUHP1-201ENST00000435012 1190 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 Z80107.1-201ENST00000436830 412 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN20P56880 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN20P56880 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN20P56880 DUXAP8-207ENST00000456786 622 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN20P56880 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN20P56880 BX284632.1-201ENST00000478218 541 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN20P56880 RPL7P41-201ENST00000485823 957 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 OR5M14P-201ENST00000506803 618 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN20P56880 AC012400.1-201ENST00000518452 381 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN20P56880 AP000859.1-201ENST00000525536 307 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.71□□□□□ -1.66
CLDN20P56880 AC024940.3-201ENST00000538551 316 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.71□□□□□ -1.66
CLDN20P56880 CYB5AP5-201ENST00000549779 389 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN20P56880 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN20P56880 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 AC022884.2-201ENST00000578535 580 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN20P56880 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN20P56880 AC008814.1-201ENST00000603797 406 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 AC009597.2-201ENST00000604659 592 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 AC093673.2-201ENST00000609674 331 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 DUXAP10-204ENST00000612052 616 ntBASIC4.71□□□□□ -1.66
CLDN20P56880 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN20P56880 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN20P56880 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CLDN20P56880 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN20P56880 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms