Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CLDN18P56856 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN18P56856 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CLDN18P56856 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.28□□□□□ -1.72
CLDN18P56856 AC090971.4-201ENST00000560291 1800 ntBASIC4.28□□□□□ -1.72
CLDN18P56856 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
CLDN18P56856 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
CLDN18P56856 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLDN18P56856 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CLDN18P56856 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLDN18P56856 AC000374.1-201ENST00000434698 1745 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN18P56856 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN18P56856 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 RNU6-386P-201ENST00000362650 107 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 RNU6-398P-201ENST00000384143 109 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLDN18P56856 RNU1-82P-201ENST00000390851 165 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 SNORD65-201ENST00000391079 73 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 RPS16P5-201ENST00000406501 404 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 AC073136.2-201ENST00000417282 849 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 AL158073.1-201ENST00000426848 1104 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN18P56856 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN18P56856 GYG1P1-201ENST00000460864 698 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 AC010326.1-201ENST00000462726 602 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 RPL12P20-201ENST00000475538 479 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN18P56856 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN18P56856 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN18P56856 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN18P56856 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLDN18P56856 OR5M2P-201ENST00000529003 936 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 AL049874.4-201ENST00000557593 255 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN18P56856 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN18P56856 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN18P56856 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN18P56856 AC234771.5-201ENST00000600161 514 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 AL590410.1-201ENST00000617925 333 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CLDN18P56856 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN18P56856 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.27□□□□□ -1.73
CLDN18P56856 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 AC005332.5-201ENST00000591222 2919 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 AC100778.3-201ENST00000580060 1750 ntBASIC4.27□□□□□ -1.73
CLDN18P56856 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN18P56856 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN18P56856 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN18P56856 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN18P56856 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN18P56856 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN18P56856 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN18P56856 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN18P56856 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN18P56856 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN18P56856 OR52B1P-201ENST00000316506 909 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 RNU6-1251P-201ENST00000364502 107 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 RNA5SP505-201ENST00000364748 108 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 SNORA56-201ENST00000383966 129 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 RNU6-225P-201ENST00000384613 103 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN18P56856 AL590806.1-201ENST00000415818 853 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN18P56856 VN1R37P-201ENST00000419096 748 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 AC092570.3-201ENST00000420113 693 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 AC245028.1-201ENST00000423259 256 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 RGS17P1-201ENST00000423358 553 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 ELOCP10-201ENST00000440624 327 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN18P56856 CEACAMP9-201ENST00000442990 513 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN18P56856 BTF3P6-201ENST00000448054 499 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 CCRL1P1-201ENST00000449542 1053 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 RPL31P20-201ENST00000449593 360 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN18P56856 AC079168.2-201ENST00000453977 416 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN18P56856 ZFRP1-201ENST00000457579 2970 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN18P56856 BTG4P1-201ENST00000510421 183 ntBASIC4.26□□□□□ -1.73
CLDN18P56856 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN18P56856 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN18P56856 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN18P56856 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN18P56856 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms