Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.71□□□□□ -1.5
GFRA1P56159 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.71□□□□□ -1.5
GFRA1P56159 AP002748.2-201ENST00000528671 348 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AC068587.4-201ENST00000533893 186 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.71□□□□□ -1.5
GFRA1P56159 NMNAT1P1-201ENST00000554095 876 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.71□□□□□ -1.5
GFRA1P56159 AC018558.5-201ENST00000565840 952 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AC092325.1-201ENST00000566449 554 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AC002519.2-203ENST00000567043 837 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.71□□□□□ -1.5
GFRA1P56159 AC141257.3-201ENST00000572906 215 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 ELOCP28-201ENST00000590044 317 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.71□□□□□ -1.5
GFRA1P56159 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.71□□□□□ -1.5
GFRA1P56159 AC104785.1-201ENST00000603220 588 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 PRELID3BP8-201ENST00000604148 295 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 RPSAP75-201ENST00000605848 301 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AC090517.2-201ENST00000614966 680 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.71□□□□□ -1.5
GFRA1P56159 AC073593.1-201ENST00000624500 411 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.71□□□□□ -1.5
GFRA1P56159 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.71□□□□□ -1.5
GFRA1P56159 AC093591.3-201ENST00000634516 308 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.71□□□□□ -1.5
GFRA1P56159 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
GFRA1P56159 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 OR4G11P-202ENST00000642116 1414 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.71□□□□□ -1.5
GFRA1P56159 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 AC005034.3-201ENST00000604845 1747 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 TNPO1P2-201ENST00000426249 2665 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.71□□□□□ -1.5
GFRA1P56159 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA1P56159 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA1P56159 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA1P56159 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA1P56159 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA1P56159 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA1P56159 TCP11X1-202ENST00000622971 1372 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA1P56159 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA1P56159 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA1P56159 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA1P56159 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA1P56159 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA1P56159 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
GFRA1P56159 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
GFRA1P56159 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA1P56159 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.7□□□□□ -1.5
GFRA1P56159 RNU5E-4P-201ENST00000364931 120 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 RPS3AP23-201ENST00000401762 784 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA1P56159 OR8F1P-201ENST00000425243 930 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.7□□□□□ -1.5
GFRA1P56159 AC244505.5-201ENST00000443639 207 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.7□□□□□ -1.5
GFRA1P56159 PAXBP1P1-201ENST00000449315 447 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 FGF7P6-202ENST00000451282 293 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 HMGN3P1-201ENST00000453847 193 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 SNX18P26-201ENST00000458433 740 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 MEMO1P3-201ENST00000459811 302 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 RN7SL254P-201ENST00000460609 284 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AC091564.1-201ENST00000464563 479 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 RPL21P6-201ENST00000479171 504 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GFRA1P56159 RN7SL170P-201ENST00000487098 295 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.7□□□□□ -1.5
GFRA1P56159 AC005912.1-201ENST00000495392 255 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 MYL12BP2-201ENST00000503948 512 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AC116353.2-201ENST00000505332 712 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.7□□□□□ -1.5
GFRA1P56159 AC010343.2-201ENST00000510162 224 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AC073581.1-201ENST00000519036 575 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.7□□□□□ -1.5
GFRA1P56159 AC084121.1-201ENST00000533882 835 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.7□□□□□ -1.5
GFRA1P56159 AC090502.2-201ENST00000549267 280 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.7□□□□□ -1.5
GFRA1P56159 SERPINE4P-201ENST00000554978 281 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.7□□□□□ -1.5
GFRA1P56159 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.7□□□□□ -1.5
GFRA1P56159 MIR4433B-201ENST00000581329 102 ntBASIC5.7□□□□□ -1.5
GFRA1P56159 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.7□□□□□ -1.5
GFRA1P56159 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.7□□□□□ -1.5
GFRA1P56159 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.7□□□□□ -1.5
GFRA1P56159 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.7□□□□□ -1.5
GFRA1P56159 AP000403.1-201ENST00000603349 851 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms