Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.54□□□□□ -1.52
COPB1P53618 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.54□□□□□ -1.52
COPB1P53618 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.54□□□□□ -1.52
COPB1P53618 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COPB1P53618 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.54□□□□□ -1.52
COPB1P53618 BMS1P7-201ENST00000602440 1052 ntBASIC5.54□□□□□ -1.52
COPB1P53618 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.54□□□□□ -1.52
COPB1P53618 AC006363.1-201ENST00000603806 463 ntBASIC5.54□□□□□ -1.52
COPB1P53618 AC114878.2-201ENST00000604863 1251 ntBASIC5.54□□□□□ -1.52
COPB1P53618 AL021707.7-201ENST00000607991 416 ntBASIC5.54□□□□□ -1.52
COPB1P53618 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
COPB1P53618 VN1R9P-201ENST00000614184 867 ntBASIC5.54□□□□□ -1.52
COPB1P53618 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
COPB1P53618 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.54□□□□□ -1.52
COPB1P53618 AC090527.3-201ENST00000619041 548 ntBASIC5.54□□□□□ -1.52
COPB1P53618 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.54□□□□□ -1.52
COPB1P53618 AP002791.1-201ENST00000623291 381 ntBASIC5.54□□□□□ -1.52
COPB1P53618 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COPB1P53618 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COPB1P53618 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COPB1P53618 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.54□□□□□ -1.52
COPB1P53618 MFSD8-220ENST00000641243 1422 ntBASIC5.54□□□□□ -1.52
COPB1P53618 AC093909.5-201ENST00000621839 1799 ntBASIC5.54□□□□□ -1.52
COPB1P53618 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.54□□□□□ -1.52
COPB1P53618 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
COPB1P53618 AL731566.1-201ENST00000620490 1937 ntBASIC5.54□□□□□ -1.52
COPB1P53618 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COPB1P53618 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
COPB1P53618 AC053481.2-202ENST00000582394 1500 ntBASIC5.53□□□□□ -1.52
COPB1P53618 AC133552.1-201ENST00000569988 4007 ntBASIC5.53□□□□□ -1.52
COPB1P53618 MFSD8-213ENST00000641134 1327 ntBASIC5.53□□□□□ -1.52
COPB1P53618 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
COPB1P53618 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPB1P53618 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPB1P53618 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPB1P53618 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
COPB1P53618 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.53□□□□□ -1.52
COPB1P53618 AC010132.2-201ENST00000295493 1043 ntBASIC5.53□□□□□ -1.52
COPB1P53618 RN7SKP113-201ENST00000363891 295 ntBASIC5.53□□□□□ -1.52
COPB1P53618 RNU6-1005P-201ENST00000384519 107 ntBASIC5.53□□□□□ -1.52
COPB1P53618 TAS2R15P-201ENST00000390674 928 ntBASIC5.53□□□□□ -1.52
COPB1P53618 AL356968.2-201ENST00000412769 1257 ntBASIC5.53□□□□□ -1.52
COPB1P53618 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.53□□□□□ -1.52
COPB1P53618 NPM1P4-201ENST00000414095 812 ntBASIC5.53□□□□□ -1.52
COPB1P53618 QRSL1P2-201ENST00000418582 964 ntBASIC5.53□□□□□ -1.52
COPB1P53618 BTF3P9-201ENST00000418784 283 ntBASIC5.53□□□□□ -1.52
COPB1P53618 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.53□□□□□ -1.52
COPB1P53618 AC005005.2-201ENST00000420779 380 ntBASIC5.53□□□□□ -1.52
COPB1P53618 RPL12P28-201ENST00000430852 489 ntBASIC5.53□□□□□ -1.52
COPB1P53618 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COPB1P53618 MTCYBP31-201ENST00000438855 1122 ntBASIC5.53□□□□□ -1.52
COPB1P53618 AL358794.1-201ENST00000445689 381 ntBASIC5.53□□□□□ -1.52
COPB1P53618 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.53□□□□□ -1.52
COPB1P53618 RPS17P2-201ENST00000461663 408 ntBASIC5.53□□□□□ -1.52
COPB1P53618 AC108693.1-201ENST00000496068 432 ntBASIC5.53□□□□□ -1.52
COPB1P53618 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.53□□□□□ -1.52
COPB1P53618 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.53□□□□□ -1.52
COPB1P53618 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.53□□□□□ -1.52
COPB1P53618 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.53□□□□□ -1.52
COPB1P53618 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.53□□□□□ -1.52
COPB1P53618 ENPP7P9-201ENST00000514456 627 ntBASIC5.53□□□□□ -1.52
COPB1P53618 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.53□□□□□ -1.52
COPB1P53618 RNA5SP34-201ENST00000516887 130 ntBASIC5.53□□□□□ -1.52
COPB1P53618 FTH1P11-201ENST00000517577 551 ntBASIC5.53□□□□□ -1.52
COPB1P53618 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.53□□□□□ -1.52
COPB1P53618 MTATP6P15-201ENST00000527233 835 ntBASIC5.53□□□□□ -1.52
COPB1P53618 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.53□□□□□ -1.52
COPB1P53618 AL049830.4-201ENST00000555149 351 ntBASIC5.53□□□□□ -1.52
COPB1P53618 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.53□□□□□ -1.52
COPB1P53618 AC021483.2-201ENST00000567415 758 ntBASIC5.53□□□□□ -1.52
COPB1P53618 RN7SL435P-201ENST00000584418 282 ntBASIC5.53□□□□□ -1.52
COPB1P53618 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.53□□□□□ -1.52
COPB1P53618 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.53□□□□□ -1.52
COPB1P53618 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.53□□□□□ -1.52
COPB1P53618 AC006386.1-201ENST00000619436 415 ntBASIC5.53□□□□□ -1.52
COPB1P53618 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.53□□□□□ -1.52
COPB1P53618 AC083865.1-201ENST00000636634 831 ntBASIC5.53□□□□□ -1.52
COPB1P53618 AC017104.5-201ENST00000637647 639 ntBASIC5.53□□□□□ -1.52
COPB1P53618 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPB1P53618 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPB1P53618 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.53□□□□□ -1.52
COPB1P53618 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPB1P53618 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
COPB1P53618 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
COPB1P53618 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPB1P53618 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COPB1P53618 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPB1P53618 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPB1P53618 SMG1P4-204ENST00000523028 4131 ntBASIC5.53□□□□□ -1.52
COPB1P53618 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPB1P53618 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
COPB1P53618 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
COPB1P53618 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.52□□□□□ -1.53
COPB1P53618 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COPB1P53618 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
COPB1P53618 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.52□□□□□ -1.53
COPB1P53618 AL603750.1-201ENST00000624216 1717 ntBASIC5.52□□□□□ -1.53
COPB1P53618 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.52□□□□□ -1.53
COPB1P53618 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COPB1P53618 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms