Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
NUP98P52948 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NUP98P52948 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.4□□□□□ -1.54
NUP98P52948 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NUP98P52948 YY1P1-201ENST00000427625 668 ntBASIC5.4□□□□□ -1.54
NUP98P52948 SERPINA7P1-201ENST00000443077 631 ntBASIC5.4□□□□□ -1.54
NUP98P52948 RPS7P7-201ENST00000463499 571 ntBASIC5.4□□□□□ -1.54
NUP98P52948 RPL35AP15-201ENST00000468042 339 ntBASIC5.4□□□□□ -1.54
NUP98P52948 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.4□□□□□ -1.54
NUP98P52948 DPPA3P2-201ENST00000553589 478 ntBASIC5.4□□□□□ -1.54
NUP98P52948 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
NUP98P52948 AC100871.1-201ENST00000507871 1456 ntBASIC5.4□□□□□ -1.55
NUP98P52948 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.4□□□□□ -1.55
NUP98P52948 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NUP98P52948 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NUP98P52948 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NUP98P52948 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.4□□□□□ -1.55
NUP98P52948 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP98P52948 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
NUP98P52948 PCAT14-202ENST00000627127 3935 ntBASIC5.39□□□□□ -1.55
NUP98P52948 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NUP98P52948 AL358178.1-201ENST00000407698 397 ntBASIC5.39□□□□□ -1.55
NUP98P52948 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.39□□□□□ -1.55
NUP98P52948 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.39□□□□□ -1.55
NUP98P52948 FTH1P21-201ENST00000512179 511 ntBASIC5.39□□□□□ -1.55
NUP98P52948 MTCO1P49-201ENST00000523429 802 ntBASIC5.39□□□□□ -1.55
NUP98P52948 AC087499.8-201ENST00000578406 226 ntBASIC5.39□□□□□ -1.55
NUP98P52948 MIR7151-201ENST00000617477 60 ntBASIC5.39□□□□□ -1.55
NUP98P52948 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.39□□□□□ -1.55
NUP98P52948 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.39□□□□□ -1.55
NUP98P52948 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP98P52948 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP98P52948 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP98P52948 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP98P52948 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NUP98P52948 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP98P52948 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP98P52948 RN7SKP224-201ENST00000364140 325 ntBASIC5.39□□□□□ -1.55
NUP98P52948 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NUP98P52948 MRPL50P1-201ENST00000431951 384 ntBASIC5.39□□□□□ -1.55
NUP98P52948 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.39□□□□□ -1.55
NUP98P52948 AL592156.1-201ENST00000508758 304 ntBASIC5.39□□□□□ -1.55
NUP98P52948 GLRXP2-201ENST00000555594 321 ntBASIC5.39□□□□□ -1.55
NUP98P52948 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NUP98P52948 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUP98P52948 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NUP98P52948 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NUP98P52948 AC097461.1-201ENST00000568928 2821 ntBASIC5.38□□□□□ -1.55
NUP98P52948 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUP98P52948 AL022393.1-201ENST00000625142 1677 ntBASIC5.38□□□□□ -1.55
NUP98P52948 AC027228.2-201ENST00000567141 2154 ntBASIC5.38□□□□□ -1.55
NUP98P52948 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NUP98P52948 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUP98P52948 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUP98P52948 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUP98P52948 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUP98P52948 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.38□□□□□ -1.55
NUP98P52948 Z95327.1-201ENST00000446082 482 ntBASIC5.38□□□□□ -1.55
NUP98P52948 PTMAP3-201ENST00000447474 330 ntBASIC5.38□□□□□ -1.55
NUP98P52948 AP002812.1-201ENST00000495378 474 ntBASIC5.38□□□□□ -1.55
NUP98P52948 MIR8069-1-201ENST00000616627 86 ntBASIC5.38□□□□□ -1.55
NUP98P52948 MIR8069-2-201ENST00000621412 86 ntBASIC5.38□□□□□ -1.55
NUP98P52948 AC112484.5-201ENST00000624189 228 ntBASIC5.38□□□□□ -1.55
NUP98P52948 OR8B1P-202ENST00000641132 1178 ntBASIC5.38□□□□□ -1.55
NUP98P52948 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
NUP98P52948 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NUP98P52948 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NUP98P52948 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NUP98P52948 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.38□□□□□ -1.55
NUP98P52948 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NUP98P52948 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP98P52948 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NUP98P52948 RN7SKP182-201ENST00000410772 298 ntBASIC5.37□□□□□ -1.55
NUP98P52948 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.37□□□□□ -1.55
NUP98P52948 OR8R1P-201ENST00000543943 764 ntBASIC5.37□□□□□ -1.55
NUP98P52948 HMGB2P1-201ENST00000591146 634 ntBASIC5.37□□□□□ -1.55
NUP98P52948 AL161729.3-201ENST00000603533 673 ntBASIC5.37□□□□□ -1.55
NUP98P52948 AL160290.3-201ENST00000604869 165 ntBASIC5.37□□□□□ -1.55
NUP98P52948 AL353726.1-201ENST00000614041 1000 ntBASIC5.37□□□□□ -1.55
NUP98P52948 AC039056.2-201ENST00000622261 511 ntBASIC5.37□□□□□ -1.55
NUP98P52948 AL161637.1-201ENST00000622380 412 ntBASIC5.37□□□□□ -1.55
NUP98P52948 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.37□□□□□ -1.55
NUP98P52948 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
NUP98P52948 TMEM30CP-203ENST00000637814 1035 ntBASIC5.37□□□□□ -1.55
NUP98P52948 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
NUP98P52948 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NUP98P52948 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NUP98P52948 AL122126.1-201ENST00000546905 1318 ntBASIC5.37□□□□□ -1.55
NUP98P52948 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.37□□□□□ -1.55
NUP98P52948 AC000374.1-201ENST00000434698 1745 ntBASIC5.37□□□□□ -1.55
NUP98P52948 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP98P52948 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NUP98P52948 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
NUP98P52948 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NUP98P52948 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP98P52948 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NUP98P52948 MRPS21P3-201ENST00000436696 262 ntBASIC5.37□□□□□ -1.55
NUP98P52948 VN1R32P-201ENST00000452234 905 ntBASIC5.37□□□□□ -1.55
NUP98P52948 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.37□□□□□ -1.55
NUP98P52948 RPL36AP13-201ENST00000457490 317 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms