Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.92□□□□□ -1.62
HNF4AP41235 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 AC024023.1-201ENST00000624530 922 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 CR392039.4-201ENST00000624968 501 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.92□□□□□ -1.62
HNF4AP41235 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HNF4AP41235 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HNF4AP41235 CIR1P2-201ENST00000514821 1342 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 AL590763.1-201ENST00000398297 1545 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
HNF4AP41235 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HNF4AP41235 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.91□□□□□ -1.62
HNF4AP41235 AC100778.3-201ENST00000580060 1750 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HNF4AP41235 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.91□□□□□ -1.62
HNF4AP41235 GTF2H2B-203ENST00000508065 1432 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HNF4AP41235 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HNF4AP41235 RAD1P1-201ENST00000231383 813 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HNF4AP41235 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HNF4AP41235 MIR1178-201ENST00000408396 91 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 LINC01881-201ENST00000416103 412 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.91□□□□□ -1.62
HNF4AP41235 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HNF4AP41235 EIF2S2P3-201ENST00000428356 999 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.91□□□□□ -1.62
HNF4AP41235 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.91□□□□□ -1.62
HNF4AP41235 RPL35AP21-201ENST00000437667 333 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.91□□□□□ -1.62
HNF4AP41235 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.91□□□□□ -1.62
HNF4AP41235 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.91□□□□□ -1.62
HNF4AP41235 MTND2P8-201ENST00000450555 1025 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 AL389915.2-201ENST00000454576 441 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.91□□□□□ -1.62
HNF4AP41235 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.91□□□□□ -1.62
HNF4AP41235 AC073073.1-201ENST00000493920 463 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.91□□□□□ -1.62
HNF4AP41235 AC111193.1-201ENST00000504097 155 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.91□□□□□ -1.62
HNF4AP41235 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.91□□□□□ -1.62
HNF4AP41235 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.91□□□□□ -1.62
HNF4AP41235 AC090819.1-201ENST00000523800 1111 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 AP002812.4-201ENST00000532139 286 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 OR10G5P-201ENST00000532733 358 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.91□□□□□ -1.62
HNF4AP41235 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.91□□□□□ -1.62
HNF4AP41235 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.91□□□□□ -1.62
HNF4AP41235 AC027176.2-201ENST00000559166 746 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 AC090079.2-201ENST00000575289 768 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 AC011840.5-201ENST00000582125 771 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 ADAD1P2-201ENST00000588476 646 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.91□□□□□ -1.62
HNF4AP41235 ZNF92P3-201ENST00000596594 954 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.91□□□□□ -1.62
HNF4AP41235 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.91□□□□□ -1.62
HNF4AP41235 AC020978.9-201ENST00000624380 1141 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 AP003072.4-201ENST00000624580 310 ntBASIC4.91□□□□□ -1.62
HNF4AP41235 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
HNF4AP41235 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.91□□□□□ -1.62
HNF4AP41235 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HNF4AP41235 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HNF4AP41235 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.91□□□□□ -1.62
HNF4AP41235 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HNF4AP41235 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HNF4AP41235 NEAT1-202ENST00000501122 22743 ntBASIC4.9□□□□□ -1.62
HNF4AP41235 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HNF4AP41235 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
HNF4AP41235 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.9□□□□□ -1.62
HNF4AP41235 AC074029.4-201ENST00000624796 1859 ntBASIC4.9□□□□□ -1.62
HNF4AP41235 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
HNF4AP41235 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.62
HNF4AP41235 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HNF4AP41235 UBBP2-201ENST00000376781 231 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HNF4AP41235 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HNF4AP41235 AL078599.1-201ENST00000402075 293 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 AL359643.1-201ENST00000404109 423 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 AL590290.1-201ENST00000405336 380 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.9□□□□□ -1.63
HNF4AP41235 AC013429.2-201ENST00000418798 781 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 BX510359.3-201ENST00000422168 306 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.9□□□□□ -1.63
HNF4AP41235 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.9□□□□□ -1.63
HNF4AP41235 ZNF965P-201ENST00000432501 817 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.9□□□□□ -1.63
HNF4AP41235 RPL7AP61-201ENST00000443410 636 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.9□□□□□ -1.63
HNF4AP41235 MTND5P8-201ENST00000449817 1083 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HNF4AP41235 AC092647.2-201ENST00000452998 253 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 RN7SL177P-201ENST00000476596 299 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 RPS4XP14-201ENST00000493072 781 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 RN7SKP141-201ENST00000516167 338 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HNF4AP41235 AC090022.1-201ENST00000546569 311 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.9□□□□□ -1.63
HNF4AP41235 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.9□□□□□ -1.63
HNF4AP41235 RN7SL435P-201ENST00000584418 282 ntBASIC4.9□□□□□ -1.63
HNF4AP41235 NF1P5-201ENST00000588287 448 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms