Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ABCF2P2-201ENST00000450549 296 ntBASIC3.24□□□□□ -1.89
CKS2P33552 AC084754.1-201ENST00000463466 464 ntBASIC3.24□□□□□ -1.89
CKS2P33552 RPS26P15-201ENST00000488067 348 ntBASIC3.24□□□□□ -1.89
CKS2P33552 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.24□□□□□ -1.89
CKS2P33552 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.24□□□□□ -1.89
CKS2P33552 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.24□□□□□ -1.89
CKS2P33552 RNA5SP497-201ENST00000516081 97 ntBASIC3.24□□□□□ -1.89
CKS2P33552 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.24□□□□□ -1.89
CKS2P33552 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CKS2P33552 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.24□□□□□ -1.89
CKS2P33552 AC092490.3-201ENST00000545370 572 ntBASIC3.24□□□□□ -1.89
CKS2P33552 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.24□□□□□ -1.89
CKS2P33552 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.24□□□□□ -1.89
CKS2P33552 SULT1C2P2-201ENST00000562517 294 ntBASIC3.24□□□□□ -1.89
CKS2P33552 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.24□□□□□ -1.89
CKS2P33552 FKBP1AP1-201ENST00000594588 318 ntBASIC3.24□□□□□ -1.89
CKS2P33552 AC068790.5-201ENST00000602741 355 ntBASIC3.24□□□□□ -1.89
CKS2P33552 AC008536.1-201ENST00000602872 669 ntBASIC3.24□□□□□ -1.89
CKS2P33552 QTRT1P1-201ENST00000604344 1078 ntBASIC3.24□□□□□ -1.89
CKS2P33552 AC012603.1-201ENST00000606424 528 ntBASIC3.24□□□□□ -1.89
CKS2P33552 AC079395.2-201ENST00000610982 737 ntBASIC3.24□□□□□ -1.89
CKS2P33552 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.24□□□□□ -1.89
CKS2P33552 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CKS2P33552 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.24□□□□□ -1.89
CKS2P33552 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CKS2P33552 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CKS2P33552 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CKS2P33552 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CKS2P33552 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CKS2P33552 KARSP3-201ENST00000571212 1504 ntBASIC3.24□□□□□ -1.89
CKS2P33552 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CKS2P33552 AC018529.3-201ENST00000624212 2254 ntBASIC3.23□□□□□ -1.89
CKS2P33552 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.23□□□□□ -1.89
CKS2P33552 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.23□□□□□ -1.89
CKS2P33552 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CKS2P33552 IQCB2P-201ENST00000401788 1633 ntBASIC3.23□□□□□ -1.89
CKS2P33552 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CKS2P33552 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.23□□□□□ -1.89
CKS2P33552 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CKS2P33552 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.23□□□□□ -1.89
CKS2P33552 AC011155.1-201ENST00000316512 456 ntBASIC3.23□□□□□ -1.89
CKS2P33552 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CKS2P33552 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS2P33552 SNORA74C-2-201ENST00000411179 201 ntBASIC3.23□□□□□ -1.89
CKS2P33552 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS2P33552 OR51B3P-201ENST00000412287 913 ntBASIC3.23□□□□□ -1.89
CKS2P33552 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS2P33552 GJA6P-201ENST00000415117 1042 ntBASIC3.23□□□□□ -1.89
CKS2P33552 AC009302.1-201ENST00000417147 390 ntBASIC3.23□□□□□ -1.89
CKS2P33552 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS2P33552 OR52B5P-201ENST00000435337 951 ntBASIC3.23□□□□□ -1.89
CKS2P33552 RHOT1P3-201ENST00000436571 331 ntBASIC3.23□□□□□ -1.89
CKS2P33552 RPSAP41-201ENST00000439695 860 ntBASIC3.23□□□□□ -1.89
CKS2P33552 AP000281.1-201ENST00000444036 316 ntBASIC3.23□□□□□ -1.89
CKS2P33552 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS2P33552 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.23□□□□□ -1.89
CKS2P33552 NDUFS5P3-201ENST00000450668 321 ntBASIC3.23□□□□□ -1.89
CKS2P33552 AL162388.1-201ENST00000450912 352 ntBASIC3.23□□□□□ -1.89
CKS2P33552 AC010733.1-201ENST00000451515 401 ntBASIC3.23□□□□□ -1.89
CKS2P33552 AC012671.1-201ENST00000451912 203 ntBASIC3.23□□□□□ -1.89
CKS2P33552 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.23□□□□□ -1.89
CKS2P33552 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CKS2P33552 PPM1AP1-201ENST00000502740 1135 ntBASIC3.23□□□□□ -1.89
CKS2P33552 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS2P33552 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS2P33552 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS2P33552 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS2P33552 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.23□□□□□ -1.89
CKS2P33552 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.23□□□□□ -1.89
CKS2P33552 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CKS2P33552 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC3.23□□□□□ -1.89
CKS2P33552 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.23□□□□□ -1.89
CKS2P33552 RPL23AP97-201ENST00000568955 471 ntBASIC3.23□□□□□ -1.89
CKS2P33552 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CKS2P33552 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.23□□□□□ -1.89
CKS2P33552 AC004948.1-201ENST00000609858 672 ntBASIC3.23□□□□□ -1.89
CKS2P33552 AC093799.2-201ENST00000610062 578 ntBASIC3.23□□□□□ -1.89
CKS2P33552 EIF3FP1-201ENST00000613970 806 ntBASIC3.23□□□□□ -1.89
CKS2P33552 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CKS2P33552 AC067852.7-201ENST00000623270 535 ntBASIC3.23□□□□□ -1.89
CKS2P33552 AC019278.1-201ENST00000623516 479 ntBASIC3.23□□□□□ -1.89
CKS2P33552 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.23□□□□□ -1.89
CKS2P33552 OR52B5P-202ENST00000641118 1110 ntBASIC3.23□□□□□ -1.89
CKS2P33552 AC018555.1-201ENST00000567548 1980 ntBASIC3.23□□□□□ -1.89
CKS2P33552 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.23□□□□□ -1.89
CKS2P33552 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.23□□□□□ -1.89
CKS2P33552 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.23□□□□□ -1.89
CKS2P33552 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.23□□□□□ -1.89
CKS2P33552 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.23□□□□□ -1.89
CKS2P33552 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CKS2P33552 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CKS2P33552 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.22□□□□□ -1.89
CKS2P33552 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CKS2P33552 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CKS2P33552 MIR365B-201ENST00000362317 111 ntBASIC3.22□□□□□ -1.89
CKS2P33552 SNORA71.2-201ENST00000364941 134 ntBASIC3.22□□□□□ -1.89
CKS2P33552 HSPD1P16-201ENST00000402302 394 ntBASIC3.22□□□□□ -1.89
CKS2P33552 RPL5P19-201ENST00000404228 893 ntBASIC3.22□□□□□ -1.89
CKS2P33552 ZNF603P-201ENST00000405613 487 ntBASIC3.22□□□□□ -1.89
CKS2P33552 U3.36-201ENST00000408418 213 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms