Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.39□□□□□ -1.71
SHC1P29353 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.39□□□□□ -1.71
SHC1P29353 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.39□□□□□ -1.71
SHC1P29353 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.39□□□□□ -1.71
SHC1P29353 AL671309.1-201ENST00000603750 544 ntBASIC4.39□□□□□ -1.71
SHC1P29353 SNORD91B-202ENST00000608459 222 ntBASIC4.39□□□□□ -1.71
SHC1P29353 FAM25E-202ENST00000608562 189 ntBASIC4.39□□□□□ -1.71
SHC1P29353 AP001521.2-201ENST00000608772 546 ntBASIC4.39□□□□□ -1.71
SHC1P29353 AC097505.1-201ENST00000610199 565 ntBASIC4.39□□□□□ -1.71
SHC1P29353 AC104763.3-201ENST00000613765 618 ntBASIC4.39□□□□□ -1.71
SHC1P29353 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SHC1P29353 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.39□□□□□ -1.71
SHC1P29353 DDX18P5-201ENST00000534547 1306 ntBASIC4.39□□□□□ -1.71
SHC1P29353 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.39□□□□□ -1.71
SHC1P29353 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHC1P29353 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHC1P29353 CASC19-204ENST00000641001 2055 ntBASIC4.39□□□□□ -1.71
SHC1P29353 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHC1P29353 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
SHC1P29353 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.39□□□□□ -1.71
SHC1P29353 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SHC1P29353 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SHC1P29353 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHC1P29353 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.38□□□□□ -1.71
SHC1P29353 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
SHC1P29353 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHC1P29353 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHC1P29353 Y_RNA.62-201ENST00000362840 99 ntBASIC4.38□□□□□ -1.71
SHC1P29353 RNU6-249P-201ENST00000363016 102 ntBASIC4.38□□□□□ -1.71
SHC1P29353 RNU6-729P-201ENST00000384399 107 ntBASIC4.38□□□□□ -1.71
SHC1P29353 RNU6-925P-201ENST00000384629 104 ntBASIC4.38□□□□□ -1.71
SHC1P29353 U3.30-201ENST00000391308 210 ntBASIC4.38□□□□□ -1.71
SHC1P29353 GAPDHP15-201ENST00000398586 975 ntBASIC4.38□□□□□ -1.71
SHC1P29353 PTGES3P2-201ENST00000407942 482 ntBASIC4.38□□□□□ -1.71
SHC1P29353 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.38□□□□□ -1.71
SHC1P29353 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.38□□□□□ -1.71
SHC1P29353 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.38□□□□□ -1.71
SHC1P29353 FABP7P1-201ENST00000424004 391 ntBASIC4.38□□□□□ -1.71
SHC1P29353 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHC1P29353 OR2B7P-201ENST00000429302 934 ntBASIC4.38□□□□□ -1.71
SHC1P29353 NMNAT1P2-201ENST00000435192 860 ntBASIC4.38□□□□□ -1.71
SHC1P29353 RNF2P1-201ENST00000442955 1010 ntBASIC4.38□□□□□ -1.71
SHC1P29353 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.38□□□□□ -1.71
SHC1P29353 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHC1P29353 RBMY2TP-201ENST00000451162 947 ntBASIC4.38□□□□□ -1.71
SHC1P29353 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.38□□□□□ -1.71
SHC1P29353 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.38□□□□□ -1.71
SHC1P29353 AC234781.3-201ENST00000452540 973 ntBASIC4.38□□□□□ -1.71
SHC1P29353 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.38□□□□□ -1.71
SHC1P29353 C1DP3-201ENST00000455013 423 ntBASIC4.38□□□□□ -1.71
SHC1P29353 AC063943.1-201ENST00000465434 453 ntBASIC4.38□□□□□ -1.71
SHC1P29353 AC092902.1-201ENST00000486999 259 ntBASIC4.38□□□□□ -1.71
SHC1P29353 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.38□□□□□ -1.71
SHC1P29353 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHC1P29353 HAUS1P1-201ENST00000505275 832 ntBASIC4.38□□□□□ -1.71
SHC1P29353 MTATP6P9-201ENST00000515039 680 ntBASIC4.38□□□□□ -1.71
SHC1P29353 AC110760.3-202ENST00000515177 371 ntBASIC4.38□□□□□ -1.71
SHC1P29353 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.38□□□□□ -1.71
SHC1P29353 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.38□□□□□ -1.71
SHC1P29353 BRD9P1-201ENST00000529855 560 ntBASIC4.38□□□□□ -1.71
SHC1P29353 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHC1P29353 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHC1P29353 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.38□□□□□ -1.71
SHC1P29353 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.38□□□□□ -1.71
SHC1P29353 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.38□□□□□ -1.71
SHC1P29353 AC023158.1-201ENST00000561632 1025 ntBASIC4.38□□□□□ -1.71
SHC1P29353 AC106785.3-201ENST00000564064 847 ntBASIC4.38□□□□□ -1.71
SHC1P29353 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.38□□□□□ -1.71
SHC1P29353 MIR3934-201ENST00000579806 107 ntBASIC4.38□□□□□ -1.71
SHC1P29353 OR1AB1P-201ENST00000585564 761 ntBASIC4.38□□□□□ -1.71
SHC1P29353 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.38□□□□□ -1.71
SHC1P29353 BNIP3P31-201ENST00000604515 566 ntBASIC4.38□□□□□ -1.71
SHC1P29353 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.38□□□□□ -1.71
SHC1P29353 AC010424.2-201ENST00000607594 443 ntBASIC4.38□□□□□ -1.71
SHC1P29353 Mico1.1-201ENST00000611698 204 ntBASIC4.38□□□□□ -1.71
SHC1P29353 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SHC1P29353 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.38□□□□□ -1.71
SHC1P29353 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.38□□□□□ -1.71
SHC1P29353 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SHC1P29353 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SHC1P29353 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHC1P29353 MTND4P9-201ENST00000507819 1346 ntBASIC4.38□□□□□ -1.71
SHC1P29353 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.38□□□□□ -1.71
SHC1P29353 AC132825.1-201ENST00000463573 2247 ntBASIC4.38□□□□□ -1.71
SHC1P29353 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.38□□□□□ -1.71
SHC1P29353 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHC1P29353 BTBD10P1-201ENST00000549824 1352 ntBASIC4.38□□□□□ -1.71
SHC1P29353 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
SHC1P29353 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SHC1P29353 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHC1P29353 AP001273.1-201ENST00000624493 3152 ntBASIC4.37□□□□□ -1.71
SHC1P29353 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.37□□□□□ -1.71
SHC1P29353 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHC1P29353 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.37□□□□□ -1.71
SHC1P29353 RN7SKP149-201ENST00000363008 344 ntBASIC4.37□□□□□ -1.71
SHC1P29353 RNU4-44P-201ENST00000363050 141 ntBASIC4.37□□□□□ -1.71
SHC1P29353 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.37□□□□□ -1.71
SHC1P29353 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHC1P29353 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.37□□□□□ -1.71
SHC1P29353 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms