Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RNU6-150P-201ENST00000516237 95 ntBASIC7.27□□□□□ -1.25
RFX1P22670 Y_RNA.702-201ENST00000516843 96 ntBASIC7.27□□□□□ -1.25
RFX1P22670 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.27□□□□□ -1.25
RFX1P22670 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC7.27□□□□□ -1.25
RFX1P22670 AP001646.1-201ENST00000527936 915 ntBASIC7.27□□□□□ -1.25
RFX1P22670 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RFX1P22670 AP000790.1-201ENST00000528891 737 ntBASIC7.27□□□□□ -1.25
RFX1P22670 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.27□□□□□ -1.25
RFX1P22670 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.27□□□□□ -1.25
RFX1P22670 AC027667.1-201ENST00000545814 304 ntBASIC7.27□□□□□ -1.25
RFX1P22670 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC7.27□□□□□ -1.25
RFX1P22670 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC7.27□□□□□ -1.25
RFX1P22670 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.27□□□□□ -1.25
RFX1P22670 AC008687.2-201ENST00000597865 520 ntBASIC7.27□□□□□ -1.25
RFX1P22670 BNIP3P23-201ENST00000599655 511 ntBASIC7.27□□□□□ -1.25
RFX1P22670 AC012175.1-201ENST00000603755 531 ntBASIC7.27□□□□□ -1.25
RFX1P22670 AP000907.4-201ENST00000604143 237 ntBASIC7.27□□□□□ -1.25
RFX1P22670 MEMO1P5-201ENST00000604810 406 ntBASIC7.27□□□□□ -1.25
RFX1P22670 AC091965.4-201ENST00000607691 587 ntBASIC7.27□□□□□ -1.25
RFX1P22670 AC092954.2-201ENST00000609103 430 ntBASIC7.27□□□□□ -1.25
RFX1P22670 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.27□□□□□ -1.25
RFX1P22670 AP000894.4-201ENST00000610185 483 ntBASIC7.27□□□□□ -1.25
RFX1P22670 AC004241.2-201ENST00000614562 444 ntBASIC7.27□□□□□ -1.25
RFX1P22670 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.27□□□□□ -1.25
RFX1P22670 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC7.27□□□□□ -1.25
RFX1P22670 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.27□□□□□ -1.25
RFX1P22670 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RFX1P22670 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.27□□□□□ -1.25
RFX1P22670 AC110597.1-201ENST00000562669 3176 ntBASIC7.27□□□□□ -1.25
RFX1P22670 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.27□□□□□ -1.25
RFX1P22670 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RFX1P22670 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
RFX1P22670 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC7.27□□□□□ -1.25
RFX1P22670 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RFX1P22670 AL589993.1-201ENST00000407450 2524 ntBASIC7.27□□□□□ -1.25
RFX1P22670 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.27□□□□□ -1.25
RFX1P22670 AC097504.1-201ENST00000515103 2415 ntBASIC7.27□□□□□ -1.25
RFX1P22670 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RFX1P22670 AP002370.1-201ENST00000528055 1602 ntBASIC7.27□□□□□ -1.25
RFX1P22670 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.27□□□□□ -1.25
RFX1P22670 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.27□□□□□ -1.25
RFX1P22670 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.27□□□□□ -1.25
RFX1P22670 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC7.27□□□□□ -1.25
RFX1P22670 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.27□□□□□ -1.25
RFX1P22670 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RFX1P22670 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
RFX1P22670 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.26□□□□□ -1.25
RFX1P22670 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.26□□□□□ -1.25
RFX1P22670 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 RACGAP1P-201ENST00000550663 1879 ntBASIC7.26□□□□□ -1.25
RFX1P22670 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
RFX1P22670 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 SNORA72.1-201ENST00000363485 129 ntBASIC7.26□□□□□ -1.25
RFX1P22670 RNA5SP512-201ENST00000364550 120 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AC026310.1-201ENST00000396004 378 ntBASIC7.26□□□□□ -1.25
RFX1P22670 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 GAPDHP42-201ENST00000406848 981 ntBASIC7.26□□□□□ -1.25
RFX1P22670 RN7SKP86-201ENST00000410454 332 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AP000534.2-201ENST00000412729 568 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX1P22670 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX1P22670 AC008280.1-201ENST00000418851 412 ntBASIC7.26□□□□□ -1.25
RFX1P22670 COX6CP17-201ENST00000421389 185 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AL513174.1-201ENST00000423182 629 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC7.26□□□□□ -1.25
RFX1P22670 AC010881.1-201ENST00000433830 235 ntBASIC7.26□□□□□ -1.25
RFX1P22670 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX1P22670 SKP1P1-201ENST00000438081 489 ntBASIC7.26□□□□□ -1.25
RFX1P22670 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.26□□□□□ -1.25
RFX1P22670 OR7E125P-201ENST00000443450 846 ntBASIC7.26□□□□□ -1.25
RFX1P22670 MTND3P10-201ENST00000450967 341 ntBASIC7.26□□□□□ -1.25
RFX1P22670 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX1P22670 AP002884.1-201ENST00000479691 655 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AC041039.1-201ENST00000485656 536 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AC005912.1-201ENST00000495392 255 ntBASIC7.26□□□□□ -1.25
RFX1P22670 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 SNORA58-201ENST00000505219 137 ntBASIC7.26□□□□□ -1.25
RFX1P22670 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC7.26□□□□□ -1.25
RFX1P22670 AC093824.1-201ENST00000508796 343 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AC083906.1-201ENST00000509298 406 ntBASIC7.26□□□□□ -1.25
RFX1P22670 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC7.26□□□□□ -1.25
RFX1P22670 AC026412.2-201ENST00000512270 1075 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AC010342.1-201ENST00000514047 877 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC7.26□□□□□ -1.25
RFX1P22670 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.26□□□□□ -1.25
RFX1P22670 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC7.26□□□□□ -1.25
RFX1P22670 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RFX1P22670 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7.26□□□□□ -1.25
RFX1P22670 AL121579.2-201ENST00000555466 590 ntBASIC7.26□□□□□ -1.25
RFX1P22670 MIR4301-201ENST00000577203 66 ntBASIC7.26□□□□□ -1.25
RFX1P22670 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms