Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MTND1P16-201ENST00000465177 898 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 PFN1P6-201ENST00000476786 399 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.9□□□□□ -1.46
COL6A2P12110 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.9□□□□□ -1.46
COL6A2P12110 RNU6-1178P-201ENST00000516674 107 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.9□□□□□ -1.46
COL6A2P12110 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL6A2P12110 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.9□□□□□ -1.46
COL6A2P12110 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.9□□□□□ -1.46
COL6A2P12110 OR5G4P-201ENST00000525251 760 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.9□□□□□ -1.46
COL6A2P12110 AC090424.1-201ENST00000535243 736 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.9□□□□□ -1.46
COL6A2P12110 AC090888.3-201ENST00000558917 509 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.9□□□□□ -1.46
COL6A2P12110 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.9□□□□□ -1.46
COL6A2P12110 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.9□□□□□ -1.46
COL6A2P12110 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.9□□□□□ -1.46
COL6A2P12110 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.9□□□□□ -1.46
COL6A2P12110 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.9□□□□□ -1.46
COL6A2P12110 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.9□□□□□ -1.46
COL6A2P12110 VN1R92P-201ENST00000598511 928 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AC011891.2-201ENST00000604949 397 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 uc_338.26-201ENST00000612659 160 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AC015819.1-201ENST00000613588 663 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.9□□□□□ -1.46
COL6A2P12110 AL353726.1-201ENST00000614041 1000 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AC089999.3-201ENST00000622440 577 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.9□□□□□ -1.46
COL6A2P12110 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.9□□□□□ -1.46
COL6A2P12110 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL6A2P12110 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL6A2P12110 AC093311.1-201ENST00000506586 2021 ntBASIC5.9□□□□□ -1.47
COL6A2P12110 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
COL6A2P12110 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
COL6A2P12110 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL6A2P12110 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL6A2P12110 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL6A2P12110 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL6A2P12110 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
COL6A2P12110 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL6A2P12110 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
COL6A2P12110 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
COL6A2P12110 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.89□□□□□ -1.47
COL6A2P12110 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL6A2P12110 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
COL6A2P12110 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL6A2P12110 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL6A2P12110 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
COL6A2P12110 AC097063.1-201ENST00000426714 1797 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.89□□□□□ -1.47
COL6A2P12110 AL121657.1-201ENST00000327215 531 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL6A2P12110 RNU6-619P-201ENST00000365146 108 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.89□□□□□ -1.47
COL6A2P12110 PSMA6P1-201ENST00000400275 741 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AL133260.1-201ENST00000405720 405 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 RNA5SP198-201ENST00000410376 127 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AC007899.1-201ENST00000412776 775 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.89□□□□□ -1.47
COL6A2P12110 Z82198.3-201ENST00000421145 199 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 MTND4LP11-201ENST00000422184 280 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.89□□□□□ -1.47
COL6A2P12110 CRIP1P1-201ENST00000427567 185 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.89□□□□□ -1.47
COL6A2P12110 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AL050321.1-201ENST00000432363 400 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
COL6A2P12110 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.89□□□□□ -1.47
COL6A2P12110 NDUFS5P5-201ENST00000437256 321 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 TRIM60P18-201ENST00000441518 828 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.89□□□□□ -1.47
COL6A2P12110 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.89□□□□□ -1.47
COL6A2P12110 KATNBL1P6-201ENST00000453433 915 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.89□□□□□ -1.47
COL6A2P12110 CFTRP1-201ENST00000456646 183 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AC021006.1-201ENST00000489849 553 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.89□□□□□ -1.47
COL6A2P12110 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.89□□□□□ -1.47
COL6A2P12110 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL6A2P12110 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.89□□□□□ -1.47
COL6A2P12110 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.89□□□□□ -1.47
COL6A2P12110 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.89□□□□□ -1.47
COL6A2P12110 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.89□□□□□ -1.47
COL6A2P12110 AC126615.2-201ENST00000553003 515 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.89□□□□□ -1.47
COL6A2P12110 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.89□□□□□ -1.47
COL6A2P12110 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.89□□□□□ -1.47
COL6A2P12110 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.89□□□□□ -1.47
COL6A2P12110 ZNF322P1-201ENST00000568013 1209 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AC012414.6-201ENST00000568241 401 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL6A2P12110 AC138207.8-204ENST00000579588 527 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.89□□□□□ -1.47
COL6A2P12110 AP002360.4-201ENST00000606980 481 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AC025594.3-201ENST00000613068 790 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 MIR7844-201ENST00000616161 122 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AC069209.1-201ENST00000619282 651 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AL357562.1-201ENST00000624911 609 ntBASIC5.89□□□□□ -1.47
COL6A2P12110 AC068137.3-201ENST00000639191 341 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms