Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LDLRP01130 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LDLRP01130 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.93□□□□□ -1.62
LDLRP01130 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
LDLRP01130 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.93□□□□□ -1.62
LDLRP01130 RAD1P1-201ENST00000231383 813 ntBASIC4.93□□□□□ -1.62
LDLRP01130 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.93□□□□□ -1.62
LDLRP01130 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.93□□□□□ -1.62
LDLRP01130 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.93□□□□□ -1.62
LDLRP01130 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.93□□□□□ -1.62
LDLRP01130 MTND4LP13-201ENST00000425022 298 ntBASIC4.93□□□□□ -1.62
LDLRP01130 AC092647.3-201ENST00000443044 633 ntBASIC4.93□□□□□ -1.62
LDLRP01130 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.93□□□□□ -1.62
LDLRP01130 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.93□□□□□ -1.62
LDLRP01130 NPM1P29-201ENST00000483112 803 ntBASIC4.93□□□□□ -1.62
LDLRP01130 RN7SL205P-201ENST00000490174 284 ntBASIC4.93□□□□□ -1.62
LDLRP01130 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.93□□□□□ -1.62
LDLRP01130 PRELID3BP5-201ENST00000508612 460 ntBASIC4.93□□□□□ -1.62
LDLRP01130 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.93□□□□□ -1.62
LDLRP01130 AC138938.1-201ENST00000515431 782 ntBASIC4.93□□□□□ -1.62
LDLRP01130 RNU6-334P-201ENST00000517072 102 ntBASIC4.93□□□□□ -1.62
LDLRP01130 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LDLRP01130 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.93□□□□□ -1.62
LDLRP01130 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.93□□□□□ -1.62
LDLRP01130 AC109635.6-201ENST00000525487 1113 ntBASIC4.93□□□□□ -1.62
LDLRP01130 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.93□□□□□ -1.62
LDLRP01130 UBTFL9-201ENST00000534504 1148 ntBASIC4.93□□□□□ -1.62
LDLRP01130 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.93□□□□□ -1.62
LDLRP01130 AL512310.9-201ENST00000553311 948 ntBASIC4.93□□□□□ -1.62
LDLRP01130 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.93□□□□□ -1.62
LDLRP01130 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.93□□□□□ -1.62
LDLRP01130 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.93□□□□□ -1.62
LDLRP01130 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.93□□□□□ -1.62
LDLRP01130 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.93□□□□□ -1.62
LDLRP01130 BNIP3P27-201ENST00000599991 412 ntBASIC4.93□□□□□ -1.62
LDLRP01130 MTATP6P2-201ENST00000603319 678 ntBASIC4.93□□□□□ -1.62
LDLRP01130 AC087283.1-201ENST00000604029 1074 ntBASIC4.93□□□□□ -1.62
LDLRP01130 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.93□□□□□ -1.62
LDLRP01130 AC022106.2-201ENST00000620114 757 ntBASIC4.93□□□□□ -1.62
LDLRP01130 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.93□□□□□ -1.62
LDLRP01130 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LDLRP01130 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
LDLRP01130 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LDLRP01130 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LDLRP01130 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.93□□□□□ -1.62
LDLRP01130 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
LDLRP01130 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LDLRP01130 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LDLRP01130 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
LDLRP01130 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LDLRP01130 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
LDLRP01130 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LDLRP01130 MIR133B-201ENST00000362210 119 ntBASIC4.92□□□□□ -1.62
LDLRP01130 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDLRP01130 CHMP1B2P-201ENST00000399581 597 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AL590806.1-201ENST00000415818 853 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AC013429.2-201ENST00000418798 781 ntBASIC4.92□□□□□ -1.62
LDLRP01130 RPL36AP10-201ENST00000421785 322 ntBASIC4.92□□□□□ -1.62
LDLRP01130 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.92□□□□□ -1.62
LDLRP01130 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.92□□□□□ -1.62
LDLRP01130 AL512661.1-201ENST00000434586 1253 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.92□□□□□ -1.62
LDLRP01130 RNF2P1-201ENST00000442955 1010 ntBASIC4.92□□□□□ -1.62
LDLRP01130 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.92□□□□□ -1.62
LDLRP01130 AL031584.1-201ENST00000447169 754 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AC105399.1-202ENST00000447303 205 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AL672138.1-201ENST00000450604 1015 ntBASIC4.92□□□□□ -1.62
LDLRP01130 RPS3AP53-201ENST00000454716 778 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AC079168.1-201ENST00000458741 345 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AC092691.2-201ENST00000461787 803 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AC116562.1-201ENST00000485355 781 ntBASIC4.92□□□□□ -1.62
LDLRP01130 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDLRP01130 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.92□□□□□ -1.62
LDLRP01130 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.92□□□□□ -1.62
LDLRP01130 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.92□□□□□ -1.62
LDLRP01130 MTCYBP19-201ENST00000517463 1124 ntBASIC4.92□□□□□ -1.62
LDLRP01130 HAUS1P3-201ENST00000523909 662 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AP003102.1-201ENST00000525638 661 ntBASIC4.92□□□□□ -1.62
LDLRP01130 OR5AZ1P-201ENST00000527448 943 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.92□□□□□ -1.62
LDLRP01130 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LDLRP01130 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.92□□□□□ -1.62
LDLRP01130 AC104072.1-201ENST00000568817 668 ntBASIC4.92□□□□□ -1.62
LDLRP01130 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDLRP01130 RN7SL52P-201ENST00000584271 284 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.92□□□□□ -1.62
LDLRP01130 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.92□□□□□ -1.62
LDLRP01130 AC068020.1-201ENST00000594215 661 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AC130352.1-201ENST00000602979 661 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AC009597.2-201ENST00000604659 592 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AL162431.4-201ENST00000604674 411 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AC087783.2-201ENST00000605070 562 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AC073137.1-201ENST00000605636 634 ntBASIC4.92□□□□□ -1.62
LDLRP01130 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.92□□□□□ -1.62
LDLRP01130 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.92□□□□□ -1.62
LDLRP01130 RN7SL722P-201ENST00000617780 284 ntBASIC4.92□□□□□ -1.62
LDLRP01130 RN7SL565P-201ENST00000618246 284 ntBASIC4.92□□□□□ -1.62
LDLRP01130 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
LDLRP01130 AC097655.1-201ENST00000635075 318 ntBASIC4.92□□□□□ -1.62
LDLRP01130 FRG1DP-201ENST00000635586 771 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms