Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LSM1O15116 MT-TP-201ENST00000387461 68 ntBASIC4.59□□□□□ -1.67
LSM1O15116 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.59□□□□□ -1.67
LSM1O15116 AL080315.1-201ENST00000406055 466 ntBASIC4.59□□□□□ -1.67
LSM1O15116 SNORA11.3-201ENST00000408471 128 ntBASIC4.59□□□□□ -1.67
LSM1O15116 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.59□□□□□ -1.67
LSM1O15116 RNA5SP104-201ENST00000410989 118 ntBASIC4.59□□□□□ -1.67
LSM1O15116 RN7SKP273-201ENST00000411392 314 ntBASIC4.59□□□□□ -1.67
LSM1O15116 CEACAMP8-201ENST00000413902 580 ntBASIC4.59□□□□□ -1.67
LSM1O15116 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.59□□□□□ -1.67
LSM1O15116 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.59□□□□□ -1.67
LSM1O15116 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.59□□□□□ -1.67
LSM1O15116 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.59□□□□□ -1.67
LSM1O15116 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.59□□□□□ -1.67
LSM1O15116 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LSM1O15116 CALM1P2-201ENST00000452941 448 ntBASIC4.59□□□□□ -1.67
LSM1O15116 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.59□□□□□ -1.67
LSM1O15116 RN7SL727P-201ENST00000482164 296 ntBASIC4.59□□□□□ -1.67
LSM1O15116 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.59□□□□□ -1.67
LSM1O15116 AC140172.1-201ENST00000502928 141 ntBASIC4.59□□□□□ -1.67
LSM1O15116 HSPD1P11-201ENST00000508643 1702 ntBASIC4.59□□□□□ -1.67
LSM1O15116 AC018797.3-201ENST00000513388 1241 ntBASIC4.59□□□□□ -1.67
LSM1O15116 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.59□□□□□ -1.67
LSM1O15116 IGLVIV-53-201ENST00000520107 367 ntBASIC4.59□□□□□ -1.67
LSM1O15116 AC025857.1-201ENST00000525252 377 ntBASIC4.59□□□□□ -1.67
LSM1O15116 RPL21P7-201ENST00000557463 483 ntBASIC4.59□□□□□ -1.67
LSM1O15116 AP005901.4-201ENST00000577336 569 ntBASIC4.59□□□□□ -1.67
LSM1O15116 MIR1269B-201ENST00000580405 75 ntBASIC4.59□□□□□ -1.67
LSM1O15116 AC130352.1-201ENST00000602979 661 ntBASIC4.59□□□□□ -1.67
LSM1O15116 SNORA11.6-201ENST00000619030 128 ntBASIC4.59□□□□□ -1.67
LSM1O15116 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.59□□□□□ -1.67
LSM1O15116 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.59□□□□□ -1.67
LSM1O15116 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
LSM1O15116 AC132825.1-201ENST00000463573 2247 ntBASIC4.58□□□□□ -1.68
LSM1O15116 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
LSM1O15116 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LSM1O15116 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LSM1O15116 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LSM1O15116 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.58□□□□□ -1.68
LSM1O15116 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LSM1O15116 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.58□□□□□ -1.68
LSM1O15116 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.58□□□□□ -1.68
LSM1O15116 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
LSM1O15116 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
LSM1O15116 SNORD96B-201ENST00000386148 79 ntBASIC4.58□□□□□ -1.68
LSM1O15116 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
LSM1O15116 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LSM1O15116 AC079355.1-201ENST00000421770 223 ntBASIC4.58□□□□□ -1.68
LSM1O15116 AC099336.2-201ENST00000422457 254 ntBASIC4.58□□□□□ -1.68
LSM1O15116 RPS20P1-201ENST00000434853 354 ntBASIC4.58□□□□□ -1.68
LSM1O15116 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.58□□□□□ -1.68
LSM1O15116 EIF4A1P11-201ENST00000451239 222 ntBASIC4.58□□□□□ -1.68
LSM1O15116 AL356390.1-201ENST00000455684 397 ntBASIC4.58□□□□□ -1.68
LSM1O15116 AC099560.2-201ENST00000457554 255 ntBASIC4.58□□□□□ -1.68
LSM1O15116 RPL37AP8-201ENST00000494116 276 ntBASIC4.58□□□□□ -1.68
LSM1O15116 RPS4XP18-201ENST00000495480 763 ntBASIC4.58□□□□□ -1.68
LSM1O15116 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.58□□□□□ -1.68
LSM1O15116 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LSM1O15116 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.58□□□□□ -1.68
LSM1O15116 RN7SL802P-201ENST00000577858 299 ntBASIC4.58□□□□□ -1.68
LSM1O15116 OR1AB1P-201ENST00000585564 761 ntBASIC4.58□□□□□ -1.68
LSM1O15116 AC020910.3-201ENST00000603701 874 ntBASIC4.58□□□□□ -1.68
LSM1O15116 AP001521.2-201ENST00000608772 546 ntBASIC4.58□□□□□ -1.68
LSM1O15116 AC007497.1-201ENST00000610421 561 ntBASIC4.58□□□□□ -1.68
LSM1O15116 AC022467.1-201ENST00000614738 749 ntBASIC4.58□□□□□ -1.68
LSM1O15116 AC067852.7-201ENST00000623270 535 ntBASIC4.58□□□□□ -1.68
LSM1O15116 MIR6715B-201ENST00000637172 77 ntBASIC4.58□□□□□ -1.68
LSM1O15116 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.58□□□□□ -1.68
LSM1O15116 IRF5P1-201ENST00000504852 2164 ntBASIC4.58□□□□□ -1.68
LSM1O15116 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.58□□□□□ -1.68
LSM1O15116 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
LSM1O15116 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LSM1O15116 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LSM1O15116 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LSM1O15116 U8.4-201ENST00000363626 134 ntBASIC4.57□□□□□ -1.68
LSM1O15116 MIR3074-201ENST00000384885 81 ntBASIC4.57□□□□□ -1.68
LSM1O15116 HDGFP1-201ENST00000405943 252 ntBASIC4.57□□□□□ -1.68
LSM1O15116 GLUD1P9-201ENST00000420997 1173 ntBASIC4.57□□□□□ -1.68
LSM1O15116 PDSS1P1-201ENST00000422953 1114 ntBASIC4.57□□□□□ -1.68
LSM1O15116 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.57□□□□□ -1.68
LSM1O15116 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.57□□□□□ -1.68
LSM1O15116 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.57□□□□□ -1.68
LSM1O15116 SLC25A18P1-201ENST00000449385 454 ntBASIC4.57□□□□□ -1.68
LSM1O15116 NDUFS5P3-201ENST00000450668 321 ntBASIC4.57□□□□□ -1.68
LSM1O15116 AC006967.1-201ENST00000467608 589 ntBASIC4.57□□□□□ -1.68
LSM1O15116 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.57□□□□□ -1.68
LSM1O15116 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.57□□□□□ -1.68
LSM1O15116 AC015912.2-201ENST00000571053 181 ntBASIC4.57□□□□□ -1.68
LSM1O15116 MIR4489-201ENST00000578869 62 ntBASIC4.57□□□□□ -1.68
LSM1O15116 MIR5699-201ENST00000578903 90 ntBASIC4.57□□□□□ -1.68
LSM1O15116 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LSM1O15116 AC068790.5-201ENST00000602741 355 ntBASIC4.57□□□□□ -1.68
LSM1O15116 COX6CP4-201ENST00000605798 228 ntBASIC4.57□□□□□ -1.68
LSM1O15116 AC091979.2-201ENST00000607514 214 ntBASIC4.57□□□□□ -1.68
LSM1O15116 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.57□□□□□ -1.68
LSM1O15116 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LSM1O15116 AL359757.1-201ENST00000623176 255 ntBASIC4.57□□□□□ -1.68
LSM1O15116 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LSM1O15116 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
LSM1O15116 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms