Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.83□□□□□ -1.64
RTCAO00442 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.83□□□□□ -1.64
RTCAO00442 RNA5SP34-201ENST00000516887 130 ntBASIC4.83□□□□□ -1.64
RTCAO00442 RNA5SP230-201ENST00000517039 122 ntBASIC4.83□□□□□ -1.64
RTCAO00442 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.83□□□□□ -1.64
RTCAO00442 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.83□□□□□ -1.64
RTCAO00442 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.83□□□□□ -1.64
RTCAO00442 AC090022.1-201ENST00000546569 311 ntBASIC4.83□□□□□ -1.64
RTCAO00442 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.83□□□□□ -1.64
RTCAO00442 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.83□□□□□ -1.64
RTCAO00442 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.83□□□□□ -1.64
RTCAO00442 SUMO2P14-201ENST00000604488 293 ntBASIC4.83□□□□□ -1.64
RTCAO00442 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.83□□□□□ -1.64
RTCAO00442 AL355480.1-201ENST00000629041 99 ntBASIC4.83□□□□□ -1.64
RTCAO00442 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RTCAO00442 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTCAO00442 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.83□□□□□ -1.64
RTCAO00442 AL133412.1-201ENST00000380194 2992 ntBASIC4.83□□□□□ -1.64
RTCAO00442 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RTCAO00442 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.82□□□□□ -1.64
RTCAO00442 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.82□□□□□ -1.64
RTCAO00442 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTCAO00442 AC022031.1-201ENST00000585985 2593 ntBASIC4.82□□□□□ -1.64
RTCAO00442 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTCAO00442 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTCAO00442 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RTCAO00442 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTCAO00442 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTCAO00442 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 RNU1-106P-201ENST00000384382 164 ntBASIC4.82□□□□□ -1.64
RTCAO00442 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.82□□□□□ -1.64
RTCAO00442 U3.36-201ENST00000408418 213 ntBASIC4.82□□□□□ -1.64
RTCAO00442 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.82□□□□□ -1.64
RTCAO00442 BX510359.3-201ENST00000422168 306 ntBASIC4.82□□□□□ -1.64
RTCAO00442 COX6CP13-201ENST00000428703 226 ntBASIC4.82□□□□□ -1.64
RTCAO00442 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 RPL34P20-201ENST00000442771 351 ntBASIC4.82□□□□□ -1.64
RTCAO00442 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 AC090114.3-201ENST00000479267 829 ntBASIC4.82□□□□□ -1.64
RTCAO00442 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTCAO00442 RN7SL629P-201ENST00000489622 285 ntBASIC4.82□□□□□ -1.64
RTCAO00442 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTCAO00442 AC083829.1-201ENST00000503756 657 ntBASIC4.82□□□□□ -1.64
RTCAO00442 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.82□□□□□ -1.64
RTCAO00442 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.82□□□□□ -1.64
RTCAO00442 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTCAO00442 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.82□□□□□ -1.64
RTCAO00442 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTCAO00442 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.82□□□□□ -1.64
RTCAO00442 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.82□□□□□ -1.64
RTCAO00442 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.82□□□□□ -1.64
RTCAO00442 AP005119.2-201ENST00000579735 1105 ntBASIC4.82□□□□□ -1.64
RTCAO00442 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 MIR4660-201ENST00000583549 74 ntBASIC4.82□□□□□ -1.64
RTCAO00442 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 AC015849.2-201ENST00000605738 409 ntBASIC4.82□□□□□ -1.64
RTCAO00442 AC025175.1-201ENST00000606482 759 ntBASIC4.82□□□□□ -1.64
RTCAO00442 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.82□□□□□ -1.64
RTCAO00442 AC067852.7-201ENST00000623270 535 ntBASIC4.82□□□□□ -1.64
RTCAO00442 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.82□□□□□ -1.64
RTCAO00442 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTCAO00442 AC134882.1-201ENST00000603738 1676 ntBASIC4.82□□□□□ -1.64
RTCAO00442 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTCAO00442 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTCAO00442 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RTCAO00442 AL445487.1-201ENST00000415694 1580 ntBASIC4.82□□□□□ -1.64
RTCAO00442 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTCAO00442 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTCAO00442 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.81□□□□□ -1.64
RTCAO00442 OR51H2P-202ENST00000641424 3046 ntBASIC4.81□□□□□ -1.64
RTCAO00442 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RTCAO00442 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
RTCAO00442 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.81□□□□□ -1.64
RTCAO00442 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RTCAO00442 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 SNURFL-201ENST00000309296 343 ntBASIC4.81□□□□□ -1.64
RTCAO00442 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTCAO00442 SNORA77-201ENST00000408716 125 ntBASIC4.81□□□□□ -1.64
RTCAO00442 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.81□□□□□ -1.64
RTCAO00442 AL031736.2-201ENST00000426573 787 ntBASIC4.81□□□□□ -1.64
RTCAO00442 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.81□□□□□ -1.64
RTCAO00442 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.81□□□□□ -1.64
RTCAO00442 RHOT1P3-201ENST00000436571 331 ntBASIC4.81□□□□□ -1.64
RTCAO00442 MTND4P15-201ENST00000437913 1033 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms