Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CYCSP6-201ENST00000434498 302 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXN3O00409 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXN3O00409 PTGES3P1-201ENST00000439531 483 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 ELOCP13-201ENST00000443934 329 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.64□□□□□ -1.51
FOXN3O00409 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
FOXN3O00409 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FOXN3O00409 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.64□□□□□ -1.51
FOXN3O00409 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.64□□□□□ -1.51
FOXN3O00409 SETP20-201ENST00000457046 852 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 RPS3AP6-201ENST00000484430 795 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 MTCO3P35-201ENST00000485582 781 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.64□□□□□ -1.51
FOXN3O00409 RPL21P131-201ENST00000497298 483 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 PRELID3BP4-201ENST00000515476 571 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 Y_RNA.717-201ENST00000517106 92 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXN3O00409 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXN3O00409 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.64□□□□□ -1.51
FOXN3O00409 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.64□□□□□ -1.51
FOXN3O00409 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.64□□□□□ -1.51
FOXN3O00409 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.64□□□□□ -1.51
FOXN3O00409 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FOXN3O00409 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 AC022884.2-201ENST00000578535 580 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 PRPF19P1-201ENST00000584766 898 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXN3O00409 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.64□□□□□ -1.51
FOXN3O00409 AC008814.1-201ENST00000603797 406 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 VN1R74P-201ENST00000613259 503 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 AL139407.1-201ENST00000613826 1175 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 AC009159.2-201ENST00000617603 606 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 AL035461.2-201ENST00000619201 524 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 AC006963.1-201ENST00000624003 1052 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 AL109659.3-201ENST00000624985 950 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.64□□□□□ -1.51
FOXN3O00409 BX649567.1-201ENST00000642071 1134 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
FOXN3O00409 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
FOXN3O00409 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FOXN3O00409 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FOXN3O00409 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FOXN3O00409 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.64□□□□□ -1.51
FOXN3O00409 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.64□□□□□ -1.51
FOXN3O00409 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
FOXN3O00409 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.64□□□□□ -1.51
FOXN3O00409 ADAM5-202ENST00000399789 1942 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FOXN3O00409 AC107027.3-201ENST00000565095 3473 ntBASIC5.64□□□□□ -1.51
FOXN3O00409 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FOXN3O00409 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FOXN3O00409 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 AC004158.1-201ENST00000564508 4319 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 AC007618.1-201ENST00000366455 732 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 RNU1-74P-201ENST00000384108 171 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 MIR105-1-201ENST00000385222 81 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
FOXN3O00409 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.63□□□□□ -1.51
FOXN3O00409 AC009804.1-201ENST00000400949 179 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 AL513325.1-201ENST00000417716 1034 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXN3O00409 OR6C64P-201ENST00000419708 825 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.63□□□□□ -1.51
FOXN3O00409 GTF2IP2-201ENST00000424290 697 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXN3O00409 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.63□□□□□ -1.51
FOXN3O00409 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 HMGB1P45-201ENST00000435986 653 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXN3O00409 AL031663.1-201ENST00000437445 219 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.63□□□□□ -1.51
FOXN3O00409 RPL12P11-201ENST00000439970 501 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 MTND1P33-201ENST00000446251 917 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 AL050341.1-201ENST00000447743 313 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 HMGB1P4-201ENST00000455362 567 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 AC098862.1-201ENST00000504991 413 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.63□□□□□ -1.51
FOXN3O00409 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.63□□□□□ -1.51
FOXN3O00409 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 AC119751.1-201ENST00000513357 765 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXN3O00409 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXN3O00409 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.63□□□□□ -1.51
FOXN3O00409 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.63□□□□□ -1.51
FOXN3O00409 EEF1A1P37-201ENST00000522748 715 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 AC100784.1-201ENST00000522790 310 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXN3O00409 AL132657.2-201ENST00000564417 358 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXN3O00409 AC098935.2-201ENST00000604222 466 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms