Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
DDX39AO00148 ARL4AP5-201ENST00000404372 599 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 NCSTNP1-201ENST00000406229 144 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 AC092570.3-201ENST00000420113 693 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 AL356806.1-201ENST00000422524 916 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 AC245028.1-201ENST00000423259 256 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 AL359265.2-201ENST00000434367 631 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.29□□□□□ -1.56
DDX39AO00148 AL606490.8-201ENST00000441624 319 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 H2AFZP6-201ENST00000444403 394 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 AC099063.2-201ENST00000446360 662 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.29□□□□□ -1.56
DDX39AO00148 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.29□□□□□ -1.56
DDX39AO00148 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.29□□□□□ -1.56
DDX39AO00148 RNA5SP249-201ENST00000516127 99 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.29□□□□□ -1.56
DDX39AO00148 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.29□□□□□ -1.56
DDX39AO00148 IGKV1-32-201ENST00000519290 311 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.29□□□□□ -1.56
DDX39AO00148 AL359219.2-201ENST00000555184 348 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.29□□□□□ -1.56
DDX39AO00148 AC105129.1-201ENST00000560250 297 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 AC209154.1-201ENST00000582156 337 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 AC006453.5-201ENST00000636451 619 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
DDX39AO00148 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.29□□□□□ -1.56
DDX39AO00148 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
DDX39AO00148 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
DDX39AO00148 AC107068.1-201ENST00000563286 4218 ntBASIC5.29□□□□□ -1.56
DDX39AO00148 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.29□□□□□ -1.56
DDX39AO00148 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
DDX39AO00148 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.29□□□□□ -1.56
DDX39AO00148 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
DDX39AO00148 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.29□□□□□ -1.56
DDX39AO00148 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
DDX39AO00148 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.28□□□□□ -1.56
DDX39AO00148 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
DDX39AO00148 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
DDX39AO00148 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
DDX39AO00148 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
DDX39AO00148 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
DDX39AO00148 RNU6-225P-201ENST00000384613 103 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
DDX39AO00148 AL590762.2-201ENST00000395798 571 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 AL358178.1-201ENST00000407698 397 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 OR51B3P-201ENST00000412287 913 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 CENPIP1-201ENST00000425713 902 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 NDUFA5P1-201ENST00000433858 341 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 AC004938.1-201ENST00000438468 308 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.28□□□□□ -1.56
DDX39AO00148 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.28□□□□□ -1.56
DDX39AO00148 AL589765.3-201ENST00000446084 462 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.28□□□□□ -1.56
DDX39AO00148 AL354710.1-201ENST00000453641 246 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 RNU6-775P-201ENST00000459318 96 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.28□□□□□ -1.56
DDX39AO00148 AC021146.7-201ENST00000509604 775 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 ACTR6P1-201ENST00000514311 1104 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 RFPL4AP5-201ENST00000514977 504 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.28□□□□□ -1.56
DDX39AO00148 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.28□□□□□ -1.56
DDX39AO00148 OR10D4P-201ENST00000525892 951 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.28□□□□□ -1.56
DDX39AO00148 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.28□□□□□ -1.56
DDX39AO00148 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.28□□□□□ -1.56
DDX39AO00148 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.28□□□□□ -1.56
DDX39AO00148 AC074029.2-201ENST00000551045 634 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.28□□□□□ -1.56
DDX39AO00148 RN7SL690P-201ENST00000582087 240 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 MIR4660-201ENST00000583549 74 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.28□□□□□ -1.56
DDX39AO00148 AC084036.1-201ENST00000609190 508 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 AL672167.1-205ENST00000641112 3080 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DDX39AO00148 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
DDX39AO00148 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
DDX39AO00148 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
DDX39AO00148 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
DDX39AO00148 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.28□□□□□ -1.56
DDX39AO00148 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.28□□□□□ -1.56
DDX39AO00148 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
DDX39AO00148 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.28□□□□□ -1.56
DDX39AO00148 AL132640.2-201ENST00000559968 1698 ntBASIC5.28□□□□□ -1.56
DDX39AO00148 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
DDX39AO00148 BX005019.1-201ENST00000561881 1810 ntBASIC5.27□□□□□ -1.57
DDX39AO00148 OR9K1P-202ENST00000641111 3217 ntBASIC5.27□□□□□ -1.57
DDX39AO00148 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
DDX39AO00148 RNU6-152P-201ENST00000384037 107 ntBASIC5.27□□□□□ -1.57
DDX39AO00148 RN7SKP267-201ENST00000410381 285 ntBASIC5.27□□□□□ -1.57
DDX39AO00148 AL445487.1-201ENST00000415694 1580 ntBASIC5.27□□□□□ -1.57
DDX39AO00148 H2AFZP5-201ENST00000446960 382 ntBASIC5.27□□□□□ -1.57
DDX39AO00148 BTF3P6-201ENST00000448054 499 ntBASIC5.27□□□□□ -1.57
DDX39AO00148 AC108463.1-201ENST00000450258 347 ntBASIC5.27□□□□□ -1.57
DDX39AO00148 AC009220.1-201ENST00000451614 275 ntBASIC5.27□□□□□ -1.57
DDX39AO00148 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.27□□□□□ -1.57
DDX39AO00148 PSMC1P13-201ENST00000458195 985 ntBASIC5.27□□□□□ -1.57
DDX39AO00148 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.27□□□□□ -1.57
DDX39AO00148 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.27□□□□□ -1.57
DDX39AO00148 OR52A4P-201ENST00000472867 958 ntBASIC5.27□□□□□ -1.57
DDX39AO00148 RN7SKP92-201ENST00000517266 244 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms