Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AL390862.1-201ENST00000635467 1469 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC017007.4-201ENST00000503353 1352 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 FAM133CP-201ENST00000332869 704 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 RN7SKP292-201ENST00000365522 317 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 ATP5HP3-201ENST00000396994 486 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AL138880.1-201ENST00000405824 642 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AL009179.1-201ENST00000406085 265 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC002524.1-201ENST00000411687 547 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 QRSL1P2-201ENST00000418582 964 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 RPL7P56-201ENST00000429441 717 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 MTCO2P3-201ENST00000442543 421 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 MTCO3P16-201ENST00000454456 754 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 ANKRD26P4-201ENST00000455755 950 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 MTND4LP3-201ENST00000468320 276 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 RPS3AP43-201ENST00000479743 781 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC138938.1-201ENST00000515431 782 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AP000859.1-201ENST00000525536 307 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 OR4A2P-201ENST00000527276 913 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC023813.2-201ENST00000564321 469 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC105129.3-201ENST00000605455 485 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AL583856.2-201ENST00000606298 543 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC012557.1-201ENST00000607115 611 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 BX323046.1-201ENST00000610145 535 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AL450489.1-201ENST00000612071 468 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC007490.1-201ENST00000624321 703 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 AC024023.1-201ENST00000624530 922 ntBASIC5.59□□□□□ -1.51
CCDC78A2IDD5 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC78A2IDD5 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.59□□□□□ -1.52
CCDC78A2IDD5 ZNF733P-202ENST00000444809 1573 ntBASIC5.59□□□□□ -1.52
CCDC78A2IDD5 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.59□□□□□ -1.52
CCDC78A2IDD5 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.59□□□□□ -1.52
CCDC78A2IDD5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
CCDC78A2IDD5 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC78A2IDD5 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 BX005019.1-201ENST00000561881 1810 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 MIR323A-201ENST00000362199 86 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 RNU1-87P-201ENST00000363727 170 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 RNU4-24P-201ENST00000364565 139 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 GSTA8P-201ENST00000404253 637 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 RNU6-648P-201ENST00000410190 107 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 RNA5SP178-201ENST00000410380 128 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 GNG5P5-201ENST00000420444 220 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 AC113412.1-201ENST00000425840 504 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 VTI1BP4-201ENST00000427516 527 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 THAP5P1-201ENST00000439089 262 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 LINC02210-201ENST00000444561 288 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 AC023271.1-201ENST00000445936 1090 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 VDAC2P4-201ENST00000452925 711 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 AL133477.1-201ENST00000457472 514 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 RN7SL72P-201ENST00000460697 269 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 RN7SL197P-201ENST00000466981 299 ntBASIC5.58□□□□□ -1.52
CCDC78A2IDD5 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC78A2IDD5 IMPA1P1-201ENST00000510718 842 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms