Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Snrnp48Q9D361 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp48Q9D361 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp48Q9D361 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Snrnp48Q9D361 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp48Q9D361 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms