Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDCA3Q99618 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA3Q99618 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA3Q99618 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.32■□□□□ 0.84
CDCA3Q99618 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CDCA3Q99618 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CDCA3Q99618 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA3Q99618 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA3Q99618 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.32■□□□□ 0.84
CDCA3Q99618 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CDCA3Q99618 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDCA3Q99618 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
CDCA3Q99618 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDCA3Q99618 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA3Q99618 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA3Q99618 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA3Q99618 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA3Q99618 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA3Q99618 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.31■□□□□ 0.84
CDCA3Q99618 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA3Q99618 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA3Q99618 GCSHP2-201ENST00000560971 527 ntBASIC20.31■□□□□ 0.84
CDCA3Q99618 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA3Q99618 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.31■□□□□ 0.84
CDCA3Q99618 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA3Q99618 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDCA3Q99618 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.31■□□□□ 0.84
CDCA3Q99618 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.3■□□□□ 0.84
CDCA3Q99618 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.3■□□□□ 0.84
CDCA3Q99618 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CDCA3Q99618 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.3■□□□□ 0.84
CDCA3Q99618 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.3■□□□□ 0.84
CDCA3Q99618 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.3■□□□□ 0.84
CDCA3Q99618 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.3■□□□□ 0.84
CDCA3Q99618 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.3■□□□□ 0.84
CDCA3Q99618 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDCA3Q99618 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCA3Q99618 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
CDCA3Q99618 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CDCA3Q99618 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CDCA3Q99618 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.29■□□□□ 0.84
CDCA3Q99618 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.29■□□□□ 0.84
CDCA3Q99618 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CDCA3Q99618 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.29■□□□□ 0.84
CDCA3Q99618 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.29■□□□□ 0.84
CDCA3Q99618 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 SMG8-203ENST00000578922 2178 ntBASIC20.29■□□□□ 0.84
CDCA3Q99618 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCA3Q99618 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.28■□□□□ 0.84
CDCA3Q99618 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA3Q99618 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.28■□□□□ 0.84
CDCA3Q99618 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.28■□□□□ 0.84
CDCA3Q99618 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.28■□□□□ 0.84
CDCA3Q99618 AC079834.2-201ENST00000609776 1949 ntBASIC20.28■□□□□ 0.84
CDCA3Q99618 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA3Q99618 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA3Q99618 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA3Q99618 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA3Q99618 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCA3Q99618 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.28■□□□□ 0.84
CDCA3Q99618 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.28■□□□□ 0.84
CDCA3Q99618 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA3Q99618 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.27■□□□□ 0.84
CDCA3Q99618 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.27■□□□□ 0.84
CDCA3Q99618 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.27■□□□□ 0.84
CDCA3Q99618 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.27■□□□□ 0.84
CDCA3Q99618 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA3Q99618 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCA3Q99618 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms